DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SLC35E1 and nstp-10

DIOPT Version :9

Sequence 1:NP_079157.3 Gene:SLC35E1 / 79939 HGNCID:20803 Length:410 Species:Homo sapiens
Sequence 2:NP_001263841.1 Gene:nstp-10 / 179342 WormBaseID:WBGene00008237 Length:363 Species:Caenorhabditis elegans


Alignment Length:295 Identity:62/295 - (21%)
Similarity:117/295 - (39%) Gaps:62/295 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    30 VAALCLLWYALSAGGNVVNKVILSA-----------FPFPVTVSLCHILALCAGLPPLLRAWRVP 83
            :.|:...| ..|.|...:||.:||:           :...|||.||..|:..:....|.:.    
 Worm    31 ITAVSAYW-VFSIGLVFLNKYLLSSVQLDAPLFITWYQCLVTVFLCLFLSKTSKAYGLFKF---- 90

Human    84 PAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGKYFASVS-AHVSIWKVPVSYAHTVKATMPI 147
            |:.|:...                ..|.||||:. .:.|.:| .::.:..|.||:.:..::...:
 Worm    91 PSMPIDAK----------------ISREVLPLSV-VFVAMISFNNLCLKYVGVSFYYVGRSLTTV 138

Human   148 WVVLLSRIIMKEKQSTKVYLSLIPIISGVLLATVTE-----LSFDMWGLVSALAATLCFSLQNIF 207
            :.|:.:.:|:.:|.|.:.......||.|.||....|     ||:.  |::..:.|:|..:|..|:
 Worm   139 FNVVCTYLILGQKTSGQAIGCCALIIFGFLLGVDQEGVTGTLSYT--GVIFGVLASLSVALNAIY 201

Human   208 SKKVLRD--SRIHHLRLLNILGCHAVFFMIPTWVLVDLSAFLVSSDLTYVYQWP-------WTLL 263
            ::|||..  ..:..|.:.|.|....:|          |...|.:.:...|:.:.       |  :
 Worm   202 TRKVLSSVGDCLWRLTMYNNLNALVLF----------LPLMLFNGEFGAVFYFDKLFDTTFW--I 254

Human   264 LLAVSGFCNFAQNVIAFSILNLVSPLSYSVANATK 298
            |:.:.|...|....:....:...|||:::::...|
 Worm   255 LMTLGGVFGFMMGYVTGWQIQATSPLTHNISGTAK 289

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SLC35E1NP_079157.3 TPT 29..333 CDD:308657 62/295 (21%)
nstp-10NP_001263841.1 VRG4 31..325 CDD:227402 62/295 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.