DRSC/TRiP Functional Genomics Resources

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Protein Alignment UBXN8 and casp

DIOPT Version :10

Sequence 1:XP_011542957.1 Gene:UBXN8 / 7993 HGNCID:30307 Length:327 Species:Homo sapiens
Sequence 2:NP_611080.1 Gene:casp / 36769 FlyBaseID:FBgn0034068 Length:695 Species:Drosophila melanogaster


Alignment Length:270 Identity:67/270 - (24%)
Similarity:116/270 - (42%) Gaps:66/270 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    73 TSGADFTSRNLFPPGIKDFLLL---------C-------GRILL--LLALLTLTISVTTSWLNSF 119
            :|.|..|:||:....:...:|:         |       |.|.|  ||..|..|..:....|   
  Fly   473 SSNASLTARNIKLDKLPAIMLVGKSRQLGSNCEVLSVIHGNIGLDDLLTRLIETCEMFEEQL--- 534

Human   120 KSPQVYLKEEEEKNEKRQKLVRKKQQEAQGEKASRYIENVLKPHQEMKLRKLEERFYQMTGEAWK 184
               ||.:::|:|:..:.|  |:.:|..|               :||.....:.:...:...||.:
  Fly   535 ---QVEIRQEDERAARDQ--VKAEQDMA---------------YQETLQADMAKDAAKRQKEAAQ 579

Human   185 LSSGHKLGGDEGTSQTSFETSNREAAKSQNLPKPLTEFPSPAEQPTCKEIPDLPEEPSQTAEEVV 249
            |:...::     .|:.:.|.:.||:.:            ..|:|       .||:|||:......
  Fly   580 LAERKRM-----ESERAEEDARRESIR------------LVAQQ-------SLPQEPSEQETGTS 620

Human   250 TVALRCPSGNVLRRRFLKSYSSQVLFDWMTRIGYHISLYSLSTSFPRRPL-AVEGGQSLEDIGIT 313
            .:.:|.|:|:.|.|||..:.:.|.|.:::|..|:.|..|.|.:|:|||.| |:|..|:||.:.:.
  Fly   621 KIRVRKPTGDFLERRFFINNNLQDLLNFVTANGFLIEEYKLISSWPRRDLTAIESSQTLESLKLY 685

Human   314 VDTVLILEEK 323
            ....:||||:
  Fly   686 PQETVILEER 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UBXN8XP_011542957.1 Ubl1_cv_Nsp3_N-like 247..322 CDD:475130 26/75 (35%)
caspNP_611080.1 UBA_FAF1 12..44 CDD:270596
Ubl1_FAF1 140..215 CDD:340649
Ubl2_FAF1 236..308 CDD:340650
UAS_FAF1 392..530 CDD:239288 14/56 (25%)
tolA <531..>600 CDD:236545 18/96 (19%)
UBX_UBXN3A 616..695 CDD:340469 27/78 (35%)
Blue background indicates that the domain is not in the aligned region.

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