DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment si:ch211-168k14.2 and Pld

DIOPT Version :9

Sequence 1:XP_017213317.1 Gene:si:ch211-168k14.2 / 799278 ZFINID:ZDB-GENE-070912-149 Length:1097 Species:Danio rerio
Sequence 2:NP_001137610.1 Gene:Pld / 35554 FlyBaseID:FBgn0286511 Length:1364 Species:Drosophila melanogaster


Alignment Length:1250 Identity:486/1250 - (38%)
Similarity:672/1250 - (53%) Gaps:222/1250 - (17%)


- Green bases have known domain annotations that are detailed below.


Zfish     8 RPPKLERLESVMSKFSGSLDQDVLQDDPEELDLSGQTDLCSGELLESRNISFQAIYN-FLPFKSL 71
            :|..:||.|:              .||.||.|     |..:..::....|.|.:||. .:.|.|.
  Fly   177 KPVLVERKET--------------DDDEEEFD-----DEENNSVVLRHEIPFTSIYGPSVKFNSF 222

Zfish    72 EGVIFLEEVPILVQVTEVERFTSSRVLNPNLYTVELSHGDFKWKIKRRFKHFQALHQELLKFRAL 136
            :..:|:....|.|::.:.||..::.:|||||||:||:||.|||.||||:|||.:|||:|..||..
  Fly   223 QRKVFIPGREIHVRIVDTERSVTTHLLNPNLYTIELTHGPFKWTIKRRYKHFNSLHQQLSFFRTS 287

Zfish   137 LKIPLPSRIHSVNRRSFKG---------------------------------------------- 155
            |.||.|||.|...|.:.|.                                              
  Fly   288 LNIPFPSRSHKEKRTTLKATAREMADESTLKDLPSHTKVKQTSTPLRAEGRSSKIAGSNANNAMA 352

Zfish   156 ---------------------RKRFHGERIPTLPRRPDALVREEQLISRKMQLEDYLRNVLKKPL 199
                                 ||:....::|..|.||::||..|.|..|..||||||.|:|...|
  Fly   353 MISPNHSSILAGLTPRRIQKKRKKKKKRKLPRFPNRPESLVTVENLSVRIKQLEDYLYNLLNISL 417

Zfish   200 YRTHPATLEFLEVSQISFIQDLGPKGIEGLIFKKSG-------GNTFPVC----------YWCGS 247
            ||:|..||.|:|||.:||:..:|.||.||:|.|::|       |..|..|          |:| |
  Fly   418 YRSHHETLNFVEVSNVSFVPGMGIKGKEGVILKRTGSTRPGQAGCNFFGCFQKNCCVRCNYFC-S 481

Zfish   248 NSVCYRWSKRWLVVKDSFVLYMRPEDGQVGTVILYDKGFHIKIGALETGVRHGVTIENLCRALTI 312
            :.||..|..||..||::...|:||.||.:..|||:|:||.:..|..:||:|.|:.:....|.:.:
  Fly   482 DVVCGTWRNRWFFVKETCFGYIRPTDGSIRAVILFDQGFDVSTGIYQTGMRKGLQVLTNNRHIVL 546

Zfish   313 KCSTYRQARWWGHSIDDFSQMFGQDFLRENRHGSFTPVRENTTAKWFVNAAGYFDAIADALEGAK 377
            ||.|.|:.:.|...:.:.:..:.:||...|.|.||.|:|.||.|.|:|:.|.|..|:||.||.|.
  Fly   547 KCWTRRKCKEWMQYLKNTANSYARDFTLPNPHMSFAPMRANTHATWYVDGAQYMSAVADGLEAAL 611

Zfish   378 EEIFITAWWLSPEIFLKRPVVDGNMWRLDHVLKRKAEQGVKIFVQLYKEVEVVMGLNSEYTKKTL 442
            |||:|..|||||||::|||.:||:.||||.:|.|||||||::||.||||||:.:|:||.|:|.||
  Fly   612 EEIYIADWWLSPEIYMKRPALDGDYWRLDKILLRKAEQGVRVFVLLYKEVEMALGINSYYSKSTL 676

Zfish   443 MGLHSNIRVIRHPDHMPSTALLWAHHEKSVVIDQSLAFLGGIDLAYGRWDDYQHRLADVGSV--- 504
             ..|.||:|:|||||.....||||||||.|||||:.||:|||||.||||||:.|||.|:||:   
  Fly   677 -AKHENIKVMRHPDHARGGILLWAHHEKIVVIDQTYAFMGGIDLCYGRWDDHHHRLTDLGSISTS 740

Zfish   505 ------RRSP-----------------------------QQSPAISPSLTHQSV--ATVEEGEEV 532
                  ||:|                             ::.|:..|...:.|:  .|::.|:.:
  Fly   741 SFSGSTRRTPSLYFTKDDTDSAFGSRKSSRNAHYDTSAKERPPSPPPDEPNTSIELKTLKPGDRL 805

Zfish   533 KLNVVVEEIHIGEGGAGRAGDAGSMEDPSEICTSFMMTMPKEDQRENSLTLPTERLLRTPSEKSH 597
            .:                         ||.:.:|     |.|...|:.:.|...: |.||..:..
  Fly   806 LI-------------------------PSTLVSS-----PGETPAESGIALEGMK-LNTPEMERK 839

Zfish   598 HSFD-----AAESKRYSRTSLNSRTPLTLECYTKSLSLHSSDSYSLGLHHC--------LPLPYE 649
            :..|     |.:..|..:..::..|  ..|...||..:::.:|.....|..        ..:...
  Fly   840 NVLDRLKNNAMKGARMGKDFMHRLT--ATETEEKSAEVYTIESEEATDHEVNLNMASGGQEVAIT 902

Zfish   650 TSSLRSYIGSTELCGETRFWHGKDYCNFILKDWVKLNKPFDDFIDRYKTPRMPWHDIGVMVHGKA 714
            |||.:..   :|.||:.::|.||||.|||||||:.||.||.|.|||..||||||||:|:.|.|.:
  Fly   903 TSSTQIL---SEFCGQAKYWFGKDYSNFILKDWMNLNSPFVDIIDRTTTPRMPWHDVGLCVVGTS 964

Zfish   715 ARDIARHFIQRWNFTKLVKKRSGATCYPCLMPKSL-CAPMMPAEYTDRSTQANVQVLRSVCQWST 778
            |||:|||||||||..||.|.|.. |.:|.|||||. ...:.|....:|..:...|:||||..||.
  Fly   965 ARDVARHFIQRWNAMKLEKLRDN-TRFPYLMPKSYHQVRLNPNIQQNRQQRVTCQLLRSVSAWSC 1028

Zfish   779 G---SKVHEESIHLAYVSAIQNSKHFIYIENQFFISC--------ADKTIHNSIGDALTERILRA 832
            |   :.:.|:|||.||:..|..::|::||||||||:.        |...:.|.||:.|.:||:||
  Fly  1029 GFIEADLVEQSIHDAYIQTITKAQHYVYIENQFFITMQLGMGVPGAYNNVRNQIGETLFKRIVRA 1093

Zfish   833 YREKKRFRVYVVMPLLPGFEGDISSGGGQAIKAIMHFNYRTMCRGEHSIIERLKCVMSDCWI--- 894
            ::|:|.|||||:||||||||||:....|.|::||.|:||.::.||..||:.||:    :..|   
  Fly  1094 HKERKPFRVYVIMPLLPGFEGDVGGSTGIAVRAITHWNYASISRGRTSILTRLQ----EAGIANP 1154

Zfish   895 -KYISFCGLRTHADLDGRLVTELIYVHSKLMIVDDCTVIIGSANINDRSMLGKRDSEMAVVVEDT 958
             .||||..||.|:.|:...:||||||||||:|.||..||.||||||||||:||||||:|.::.|.
  Fly  1155 ENYISFHSLRNHSFLNNTPITELIYVHSKLLIADDRVVICGSANINDRSMIGKRDSEIAAILMDE 1219

Zfish   959 ELQSSVMDGESFQAGRFARSLRKECFRLVLGLPE------DNTDISDPVSDRFYKEIWMVTAARN 1017
            |.:...|:|:.:.:|.||..|||..|:..|||.|      .:.||:|||.::|:...|...:.:|
  Fly  1220 EFEDGRMNGKKYPSGVFAGRLRKYLFKEHLGLLESEGSSRSDLDINDPVCEKFWHGTWRRISMQN 1284

Zfish  1018 ASVYDKVFRCLPTDAVLNYKILREYTCRPCMATEDPAQACSELKKIRGFLVQFPLHFLSEENLFP 1082
            ..:||:||:|:|||.|..:..||:|...|.:|...|..|.:....|:|:||..||.||::|.|.|
  Fly  1285 TEIYDEVFKCIPTDFVKTFASLRKYQEEPPLAKTAPDLAANRANDIQGYLVDLPLEFLNKEVLTP 1349

Zfish  1083 SFNSKEGMMPIELWT 1097
            ...||||::|..:||
  Fly  1350 PGTSKEGLIPTSVWT 1364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
si:ch211-168k14.2XP_017213317.1 PLN02866 72..1088 CDD:215467 464/1174 (40%)
PX_PLD 80..213 CDD:132805 67/199 (34%)
PH_PLD 201..330 CDD:269956 53/145 (37%)
PLDc_vPLD1_2_yPLD_like_1 356..501 CDD:197236 92/144 (64%)
PLDc_SF <702..727 CDD:301585 17/24 (71%)
PLDc_vPLD1_2 779..959 CDD:197302 98/194 (51%)
PLDc_SF <920..1008 CDD:301585 47/93 (51%)
PldNP_001137610.1 PX_PLD 230..431 CDD:132805 67/200 (34%)
PH_PLD 419..564 CDD:269956 53/145 (37%)
PLDc_vPLD1_2_yPLD_like_1 590..734 CDD:197236 92/144 (64%)
PLDc_vPLD1_2_yPLD_like_2 1032..1220 CDD:197239 97/191 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 236 1.000 Domainoid score I2276
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H112355
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D330134at33208
OrthoFinder 1 1.000 - - FOG0001475
OrthoInspector 1 1.000 - - otm24539
orthoMCL 1 0.900 - - OOG6_100567
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
87.820

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