DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment odad2 and p120ctn

DIOPT Version :9

Sequence 1:XP_005156286.1 Gene:odad2 / 799229 ZFINID:ZDB-GENE-100316-7 Length:1047 Species:Danio rerio
Sequence 2:NP_001036444.1 Gene:p120ctn / 3355143 FlyBaseID:FBgn0260799 Length:781 Species:Drosophila melanogaster


Alignment Length:724 Identity:151/724 - (20%)
Similarity:254/724 - (35%) Gaps:240/724 - (33%)


- Green bases have known domain annotations that are detailed below.


Zfish   303 IQDVPSAKKILHVES-----------------VDAEKTGQTLKP--YNSEEKNVLKKARQQPVQN 348
            |::.|.|..:.:|::                 :|:|.|.:.:.|  |.|:       |....:||
  Fly    91 IENHPLATTVRYVQAGQYEDTSEYGVAGLTCGIDSEYTAEAVVPYCYTSD-------ANYTGIQN 148

Zfish   349 KLGNRKKKLEPSLKWKNLGLTSPYDEGEVKARKIRESKKIFEYGTKSPTSESKKKTNISG----- 408
            ...:.|                                         |.|......||:|     
  Fly   149 TTSSIK-----------------------------------------PFSGRPFNDNINGAEAVA 172

Zfish   409 -SSLPGLQSSQKIKTPGGAEDFSESSSEEEEDEEQHERRAETATDLPSEY-WQ---IQKLVKYLK 468
             |.....:||.:.|.|..|.....:..:..|:::.:...:|  .|:.|.. |:   :.:::.:|.
  Fly   173 DSQCRTFKSSAEFKLPQFAMSSINTVPQRLEEKDDYIEGSE--NDICSTMRWRDPNLSEVISFLS 235

Zfish   469 G------ANQTATVIVLCSLRDFNLVQDTCQLAIRDVGGLEVLINLL--DTDEIR---CKIGSLK 522
            .      ||..|.:..||.:.|.|      :...|.:||:..|:.||  |:.||.   |  |:|:
  Fly   236 NPSSAIKANAAAYLQHLCYMDDPN------KQRTRSLGGIPPLVRLLSYDSPEIHKNAC--GALR 292

Zfish   523 ILKEISCNSQIRRTIANLGGLQTMVSIL-DSPDKELKCLAAETIANVAKFRRARR---------- 576
            .|.....|.:.:|.|.|.||:..:|.:| .|.:.|:|.|....:.|::.....:|          
  Fly   293 NLSYGRQNDENKRGIKNAGGIAALVHLLCRSQETEVKELVTGVLWNMSSCEDLKRSIIDEALVAV 357

Zfish   577 ---MVRQHGGIQRLVELLDCVPAGESLSLEQQRDVEVARCGALALWSCSKSTWNKEAIRRAGGIP 638
               :::.|.|       .|.|..||                     :|..:.:     |.|.|:.
  Fly   358 VCSVIKPHSG-------WDAVCCGE---------------------TCFSTVF-----RNASGVL 389

Zfish   639 MLGRLLKSPQKNMLIPVVGTLQECASEKS-----YRIAIQAEGMIEDLVKNLSCDNQELQMHCAS 698
               |.:.|..::    ..|.|:.|.....     .|.:|:...:....|:|..|..:.|.     
  Fly   390 ---RNVSSAGEH----ARGCLRNCEHLVECLLYVVRTSIEKNNIGNKTVENCVCILRNLS----- 442

Zfish   699 AIFKCAE------DKHTRDLVRQYDGLKPLVT------LLNEAEN--------KQLLAATTGAI- 742
              ::|.|      |||            |.:|      ..::.||        |:..|..:.|: 
  Fly   443 --YRCQEVDDPNYDKH------------PFITPERVIPSSSKGENLGCFGTNKKKKEANNSDALN 493

Zfish   743 --------WKCSISMENVAKFQEY----KVVEILVRLL--TNQPE--EVLVNVVGALGEC-GQIS 790
                    .|.|::...:.|..|.    :||:..:.||  .:.||  |.....:..|..| .|.|
  Fly   494 EYNISADYSKSSVTYNKLNKGYEQLWQPEVVQYYLSLLQSCSNPETLEAAAGAIQNLSACYWQPS 558

Zfish   791 ENL-ATIRRSSGIQPLVNLLTGTNQALLVNVTKAVGACATDPENMMIIDR---LDGVRLLWSLL- 850
            .:: ||:|:..|:..||.||.       :.|.:.|.|.||...|:.|..|   |.|...:..|: 
  Fly   559 IDIRATVRKEKGLPILVELLR-------MEVDRVVCAVATALRNLAIDQRNKELIGKYAMRDLVQ 616

Zfish   851 KNPNPEVQ------ASAAWAICPCI-ENAKDAGEMVRSFV--GGLELIVNLLKSQNKDVLASVCA 906
            |.|:..||      .....|:...| |..|...|..||.:  ||::.::|:.|.:.|     ..:
  Fly   617 KLPSGNVQHDQNTSDDTITAVLATINEVIKKNPEFSRSLLDSGGIDRLMNITKRKEK-----YTS 676

Zfish   907 AIAKIAKDV 915
            .:.|.|..|
  Fly   677 CVLKFASQV 685

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
odad2XP_005156286.1 armadillo repeat 460..487 CDD:293788 7/32 (22%)
armadillo repeat 495..527 CDD:293788 13/36 (36%)
armadillo repeat 543..568 CDD:293788 6/25 (24%)
armadillo repeat 576..623 CDD:293788 8/59 (14%)
armadillo repeat 628..659 CDD:293788 6/30 (20%)
Arm_3 <634..>865 CDD:330530 63/284 (22%)
armadillo repeat 669..701 CDD:293788 6/31 (19%)
armadillo repeat 713..744 CDD:293788 7/53 (13%)
armadillo repeat 761..785 CDD:293788 7/27 (26%)
armadillo repeat 793..829 CDD:293788 11/36 (31%)
armadillo repeat 834..866 CDD:293788 10/41 (24%)
HEAT_2 845..950 CDD:316194 20/81 (25%)
armadillo repeat 876..908 CDD:293788 8/33 (24%)
HEAT repeat 923..961 CDD:293787
HEAT repeat 970..992 CDD:293787
HEAT repeat 1005..1034 CDD:293787
p120ctnNP_001036444.1 ARM 227..341 CDD:237987 34/121 (28%)
armadillo repeat 227..252 CDD:293788 4/24 (17%)
armadillo repeat 260..296 CDD:293788 13/37 (35%)
armadillo repeat 304..339 CDD:293788 11/34 (32%)
ARM 307..442 CDD:237987 32/174 (18%)
armadillo repeat 347..392 CDD:293788 12/80 (15%)
armadillo repeat 515..556 CDD:293788 10/40 (25%)
ARM 516..643 CDD:237987 37/133 (28%)
armadillo repeat 562..596 CDD:293788 13/40 (33%)
armadillo repeat 601..641 CDD:293788 9/39 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2332
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.030

Return to query results.
Submit another query.