DRSC/TRiP Functional Genomics Resources

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Protein Alignment CLMP and hbs

DIOPT Version :9

Sequence 1:NP_079045.1 Gene:CLMP / 79827 HGNCID:24039 Length:373 Species:Homo sapiens
Sequence 2:NP_001286439.1 Gene:hbs / 44129 FlyBaseID:FBgn0029082 Length:1235 Species:Drosophila melanogaster


Alignment Length:302 Identity:69/302 - (22%)
Similarity:130/302 - (43%) Gaps:57/302 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    86 ASNFLAGDASLQIEPLKPSDEGRYTCKVKNS-GRYVWSHVILKVLVRPSKPKCELEGELTEGSDL 149
            |.||   :::|.||...|.|.|:|.|.|:|| |:   :...|: ..:||:|...|:..:...||.
  Fly   892 ALNF---ESALLIENTSPDDYGQYECVVRNSLGQ---ASTTLE
-FSKPSRPDAPLQLRVGNVSDT 949

Human   150 TLQCESSSGTEPIVYYWQRIREKE-GEDERLPPKSRIDYNH----PGRVLLQNLTMSYSGL---- 205
            .:....:.|.:..:..:.|:|.|: |||:         |.:    ||.   ||:  |..||    
  Fly   950 GVDLNWTPGFDGGMQTYFRLRLKQHGEDK---------YKYVDAKPGH---QNI--SLDGLKPGA 1000

Human   206 ---YQCTAGNEAGKESCV--VRVTV---------QYVQSIGMVAGAVTGIVAGALLIF-----LL 251
               :...|.||||....:  :::|:         :|.:...:....:.||.:.|:::.     |:
  Fly  1001 TYYFSVMAANEAGGSKFMPDIKLTLSKGSQPHSAEYTEKDELPNVMIIGITSAAMVLLVLNAALV 1065

Human   252 VWLLIRRKDKERYEEEERPNEI--REDAEAPKARLVKPSSSSSGSRSSRSGSSSTRSTANSASRS 314
            .|.:|||::|.:.|.|...:::  ::|:::    :.|...::..:...:..::||....| ....
  Fly  1066 AWFVIRRQNKSQSEAEPSNDDVYSKDDSQS----VYKLPITALQADVQKKAAASTYLVEN-VDII 1125

Human   315 QRTLSTDAAPQPGLATQAYSLVGPEVRGSEPKKVHHANLTKA 356
            |.|.......:..:.|..|.|..|:...:.|....|:....|
  Fly  1126 QSTAYPPKYQESSMCTPPYPLCNPDFTRTLPNPKRHSQRNSA 1167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLMPNP_079045.1 IgV_CAR_like 13..127 CDD:409552 15/41 (37%)
Ig strand B 31..35 CDD:409552
Ig strand C 48..52 CDD:409552
Ig strand E 94..98 CDD:409552 1/3 (33%)
Ig strand F 108..113 CDD:409552 2/4 (50%)
Ig strand G 121..124 CDD:409552 0/2 (0%)
IG 144..225 CDD:214652 22/94 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..373 16/95 (17%)
hbsNP_001286439.1 Ig 44..122 CDD:299845
IG_like 45..137 CDD:214653
Ig 153..231 CDD:299845
IG_like 258..342 CDD:214653
Ig 266..327 CDD:299845
IG_like 357..>414 CDD:214653
Ig 360..427 CDD:299845
Ig <468..526 CDD:299845
I-set 547..633 CDD:254352
Ig 556..631 CDD:299845
I-set 644..735 CDD:254352
IGc2 668..725 CDD:197706
IG_like 751..829 CDD:214653
IGc2 753..815 CDD:197706
Ig 852..928 CDD:143165 15/41 (37%)
FN3 935..1017 CDD:238020 24/95 (25%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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