DRSC/TRiP Functional Genomics Resources

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Protein Alignment CLMP and dpr2

DIOPT Version :9

Sequence 1:NP_079045.1 Gene:CLMP / 79827 HGNCID:24039 Length:373 Species:Homo sapiens
Sequence 2:NP_001014480.4 Gene:dpr2 / 3346227 FlyBaseID:FBgn0261871 Length:410 Species:Drosophila melanogaster


Alignment Length:358 Identity:67/358 - (18%)
Similarity:116/358 - (32%) Gaps:125/358 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    18 GTHTEIKRVAE----EKVTLPCH-HQLGLPEKDTLDIEWLL-----TDNEGNQKV---------- 62
            |...:.:|.||    |:.|.|.. ...|:|...|.......     .||.|::.|          
  Fly    84 GNSIDDEREAEEQPPEETTYPPPVFDFGMPRNITTRTGHTAAINCRVDNLGDKSVSWIRKRDLHI 148

Human    63 ----VITYSSRHVYNNLTEEQKGRVAFASNFLAGDASLQIEPLKPSDEGRYTCKVKNSGRYVWSH 123
                ::||         |.:::.:|...::  :.|.:|.::..:|.|.|.|.|:| |:...:...
  Fly   149 LTAGILTY---------TSDERFKVVRTAD--SKDWTLHVKYAQPRDSGIYECQV-NTEPKISMA 201

Human   124 VILKVLVRPSKPKCELEGE----LTEGSDLTLQCE------SSSGTEPIVYYWQR---------- 168
            ..|.|:|.|...|..:.|.    :..||.:||.|.      |:....||  ||.|          
  Fly   202 FRLNVIVTPPDAKAIIAGPTDLYVKVGSSVTLTCHVKQPATSAQDIGPI--YWYRGPYILTPFVA 264

Human   169 -IREKEGEDERLPPKSRIDYNHPGRVLLQNLTMSYSGLYQCTAGNEAGKESCVVRVTVQYVQSIG 232
             ..:...:.:|:..:|.:......|:.:.|..:..:|.|.|                   :.:..
  Fly   265 HPNDAAIDLQRISMESTLAEKLQSRLRIANAQLLDTGNYTC-------------------MPTTA 310

Human   233 MVAGAVTGIVAGALLIFLLVWLLIRRKDKERYEEEERPNEIREDAEAPKARLVKPSSSSSGSR-- 295
            ..|..|..::                       .:|.|      |...|:|.::.|.|...||  
  Fly   311 EAASVVVNVI-----------------------NDESP------AAMQKSRAIRTSGSMRSSRLV 346

Human   296 ----------------SSRSGSSSTRSTANSAS 312
                            ..|.||:|...:.::.|
  Fly   347 LLLAMVASSVVRWLIGGQRIGSNSCHDSCSNLS 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CLMPNP_079045.1 IgV_CAR_like 13..127 CDD:409552 27/132 (20%)
Ig strand B 31..35 CDD:409552 1/3 (33%)
Ig strand C 48..52 CDD:409552 0/3 (0%)
Ig strand E 94..98 CDD:409552 1/3 (33%)
Ig strand F 108..113 CDD:409552 2/4 (50%)
Ig strand G 121..124 CDD:409552 0/2 (0%)
IG 144..225 CDD:214652 18/97 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 264..373 14/67 (21%)
dpr2NP_001014480.4 IG_like 113..206 CDD:214653 20/104 (19%)
Ig 116..192 CDD:299845 16/86 (19%)
ig 220..306 CDD:278476 18/106 (17%)
IG_like 220..306 CDD:214653 18/106 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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