DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FZD3 and fzd3

DIOPT Version :9

Sequence 1:NP_059108.1 Gene:FZD3 / 7976 HGNCID:4041 Length:666 Species:Homo sapiens
Sequence 2:NP_001123382.1 Gene:fzd3 / 100038082 XenbaseID:XB-GENE-484322 Length:664 Species:Xenopus tropicalis


Alignment Length:662 Identity:596/662 - (90%)
Similarity:633/662 - (95%) Gaps:1/662 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     5 WIVFSLWPLTVFMGHIGGHSLFSCEPITLRMCQDLPYNTTFMPNLLNHYDQQTAALAMEPFHPMV 69
            :::..||...|......|||||:|||||||||||||||:||||||||||||||||||||||||||
 Frog     4 YVISCLWLSVVLAQKSMGHSLFACEPITLRMCQDLPYNSTFMPNLLNHYDQQTAALAMEPFHPMV 68

Human    70 NLDCSRDFRPFLCALYAPICMEYGRVTLPCRRLCQRAYSECSKLMEMFGVPWPEDMECSRFPDCD 134
            ||:|||||||||||||||:||||||||||||:||||||:||.||||||||||||:||||||||||
 Frog    69 NLECSRDFRPFLCALYAPVCMEYGRVTLPCRKLCQRAYNECFKLMEMFGVPWPEEMECSRFPDCD 133

Human   135 EPYPRLVDLNLAGEPTEGAPVAVQRDYGFWCPRELKIDPDLGYSFLHVRDCSPPCPNMYFRREEL 199
            |||||:||::|:|:.||..|:|||||||||||||||||||||||||.|||||||||:||||||||
 Frog   134 EPYPRMVDISLSGDVTEETPLAVQRDYGFWCPRELKIDPDLGYSFLGVRDCSPPCPHMYFRREEL 198

Human   200 SFARYFIGLISIICLSATLFTFLTFLIDVTRFRYPERPIIFYAVCYMMVSLIFFIGFLLEDRVAC 264
            ||||||||:|||:||||||||||||||||||||||||||||||||||||||||||||||||:|||
 Frog   199 SFARYFIGVISIVCLSATLFTFLTFLIDVTRFRYPERPIIFYAVCYMMVSLIFFIGFLLEDKVAC 263

Human   265 NASIPAQYKASTVTQGSHNKACTMLFMILYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKAL 329
            |.:.|:||||:||||||||||||||||:|||||||||||||||||||||||||||||||||||||
 Frog   264 NGANPSQYKAATVTQGSHNKACTMLFMVLYFFTMAGSVWWVILTITWFLAAVPKWGSEAIEKKAL 328

Human   330 LFHASAWGIPGTLTIILLAMNKIEGDNISGVCFVGLYDVDALRYFVLAPLCLYVVVGVSLLLAGI 394
            |||||||||||||||||||||||||||||||||||||||.||||||||||||.||||||||||||
 Frog   329 LFHASAWGIPGTLTIILLAMNKIEGDNISGVCFVGLYDVQALRYFVLAPLCLDVVVGVSLLLAGI 393

Human   395 ISLNRVRIEIPLEKENQDKLVKFMIRIGVFSILYLVPLLVVIGCYFYEQAYRGIWETTWIQERCR 459
            |||||||||||||||||||||||||||||||||||||||||||||||||||||:|||||:||||:
 Frog   394 ISLNRVRIEIPLEKENQDKLVKFMIRIGVFSILYLVPLLVVIGCYFYEQAYRGVWETTWVQERCK 458

Human   460 EYHIPCPYQVTQMSRPDLILFLMKYLMALIVGIPSVFWVGSKKTCFEWASFFHGRRKKEIVNESR 524
            ||||||||:|||.||||||||||||||||:|||||||||||||||||||||||||:||..|||||
 Frog   459 EYHIPCPYKVTQTSRPDLILFLMKYLMALVVGIPSVFWVGSKKTCFEWASFFHGRKKKAGVNESR 523

Human   525 QVLQEPDFAQSLLRDPNTPIIRKSRGTSTQGTSTHASSTQLAMVDDQRSKAGSIHSKVSSYHGSL 589
            ||||||||||||||||||||:||||||||||||||||||||||:|||||||||:|||||||||||
 Frog   524 QVLQEPDFAQSLLRDPNTPIVRKSRGTSTQGTSTHASSTQLAMLDDQRSKAGSVHSKVSSYHGSL 588

Human   590 HRSRDGRYTPCSYRGMEERLPHGSMSRLTDHSRHSSSHRLNEQSRHSSIRDLSNNPMTHITHGTS 654
            ||||||||||||||||||||||||:|.|||||||||:||||||||..|||||| ||:.||:||||
 Frog   589 HRSRDGRYTPCSYRGMEERLPHGSLSHLTDHSRHSSTHRLNEQSRQGSIRDLS-NPLAHISHGTS 652

Human   655 MNRVIEEDGTSA 666
            |||||||||.||
 Frog   653 MNRVIEEDGASA 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD3NP_059108.1 CRD_FZ3 24..150 CDD:143558 112/125 (90%)
7tmF_FZD3 192..512 CDD:320161 302/319 (95%)
TM helix 1 201..226 CDD:320161 22/24 (92%)
TM helix 2 235..256 CDD:320161 20/20 (100%)
TM helix 3 287..313 CDD:320161 24/25 (96%)
TM helix 4 330..352 CDD:320161 21/21 (100%)
TM helix 5 366..391 CDD:320161 22/24 (92%)
TM helix 6 419..444 CDD:320161 24/24 (100%)
TM helix 7 473..498 CDD:320161 23/24 (96%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 502..507 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 538..666 114/127 (90%)
fzd3NP_001123382.1 CRD_FZ3 23..149 CDD:143558 112/125 (90%)
7tmF_FZD3 191..511 CDD:320161 302/319 (95%)
TM helix 1 200..225 CDD:320161 22/24 (92%)
TM helix 2 234..255 CDD:320161 20/20 (100%)
TM helix 3 286..312 CDD:320161 24/25 (96%)
TM helix 4 329..351 CDD:320161 21/21 (100%)
TM helix 5 365..390 CDD:320161 22/24 (92%)
TM helix 6 418..443 CDD:320161 24/24 (100%)
TM helix 7 472..497 CDD:320161 23/24 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 630 1.000 Domainoid score I2141
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H23004
Inparanoid 1 1.050 1254 1.000 Inparanoid score I2064
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG42366
OrthoDB 1 1.010 - - D126863at7742
OrthoFinder 1 1.000 - - FOG0009631
OrthoInspector 1 1.000 - - oto153928
Panther 1 1.100 - - LDO PTHR11309
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X126
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.080

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