DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNIP1 and CG17168

DIOPT Version :10

Sequence 1:NP_078976.2 Gene:SNIP1 / 79753 HGNCID:30587 Length:396 Species:Homo sapiens
Sequence 2:NP_001015254.1 Gene:CG17168 / 3354996 FlyBaseID:FBgn0039943 Length:421 Species:Drosophila melanogaster


Alignment Length:433 Identity:170/433 - (39%)
Similarity:232/433 - (53%) Gaps:77/433 - (17%)


- Green bases have known domain annotations that are detailed below.


Human     2 KAVKSERERGSRRRHRDGDVVLPAGVVVKQERLSPEVAPPAHRRPDHSGGSPSPPTSEPARSGHR 66
            |....|.|...:|...:||..:....:.|.:::.        :|......|.|..::|..:|.| 
  Fly     3 KQRNKEHELEQQRTGHEGDTKMSDRNLSKTKKIK--------QRATADSSSSSDSSNESKKSNH- 58

Human    67 GNRARGVSRSPPKKKNKASGRR---SKSPRSKRNRSPHHSTVKVKQERE--DHPRRGREDR---- 122
                   |...|.:|.:.:|:|   |...:.||::...|.:..|.::|.  |.|.|....|    
  Fly    59 -------SSLSPNRKQRTAGKRQRDSSQSQEKRHKQLTHPSEDVHEQRSKWDSPERSNSHRNSTR 116

Human   123 -------QHREPSEQEHRR--ARNSDRD----------------RHRGHS---------HQRRTS 153
                   :.||.||:|..|  .||.:||                |||..|         .|||.:
  Fly   117 QRRNTRSRSRERSERERDRDCERNKERDYNMQSSKERWQRSPALRHRSRSSERKNRERDRQRRPT 181

Human   154 NERPGSGQGQGRDR--DTQNLQAQEEEREFYNARRREHRQRNDVGGGGSESQELVPRPGGNNKEK 216
            ..||.......|||  ..::|..:.:..:.:|   ..::..:|....|.|..|.||      .|.
  Fly   182 ERRPVRRSQSPRDRCHGGRDLDQRRQRNQRHN---NSNKNEDDHYVWGKEVDEKVP------AEN 237

Human   217 EVPA-KEKPSFELSGALLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSA 280
            :||. ||||:|.|||||.||||...|||:|||||||||.||:||||||||.:..||.::|||||.
  Fly   238 DVPVDKEKPNFGLSGALTEDTNKLNGVVVKYSEPPEARKPKRRWRLYPFKGETALPTLHIHRQSC 302

Human   281 YLLGRHRRIADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIE 345
            :|:||.|::.|:.:||||||||||..|||||.:.|.||:.|:||:.|:|||.|.||||||||:|:
  Fly   303 FLVGRDRKVVDLAVDHPSCSKQHAALQYRLVPFEREDGSHGKRVRLYLIDLDSANGTFLNNKKID 367

Human   346 PQRYYELKEKDVLKFGFSSREYVLLHESSDTSEIDRKDDEDEE 388
            .::||||.||||:||||||||||||||:|      ::|.||::
  Fly   368 ARKYYELIEKDVIKFGFSSREYVLLHENS------KEDQEDDD 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNIP1NP_078976.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..227 65/270 (24%)
PRK12678 24..>208 CDD:237171 51/228 (22%)
FHA_SNIP1 224..372 CDD:438770 100/147 (68%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 373..396 4/16 (25%)
CG17168NP_001015254.1 SF-CC1 138..>246 CDD:273721 29/116 (25%)
FHA_SNIP1 246..394 CDD:438770 100/147 (68%)

Return to query results.
Submit another query.