DRSC/TRiP Functional Genomics Resources

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Protein Alignment nim1kb and par-1

DIOPT Version :9

Sequence 1:XP_001337548.3 Gene:nim1kb / 797096 ZFINID:ZDB-GENE-091204-283 Length:433 Species:Danio rerio
Sequence 2:NP_995894.2 Gene:par-1 / 2768852 FlyBaseID:FBgn0260934 Length:1170 Species:Drosophila melanogaster


Alignment Length:384 Identity:149/384 - (38%)
Similarity:228/384 - (59%) Gaps:28/384 - (7%)


- Green bases have known domain annotations that are detailed below.


Zfish    64 KRVGFYKVRGQIGCGNFSKVKLATHALTKDKVAVKIMDKMRLDVQTQRMLTREISNMESLYHPNL 128
            :.:|.||:...||.|||:|||||.|..|..:||:||:||.:|:..:.:.|.||:..|:.|.|||:
  Fly   248 EHIGKYKLIKTIGKGNFAKVKLAKHLPTGKEVAIKIIDKTQLNPGSLQKLFREVRIMKMLDHPNI 312

Zfish   129 LQLFEVLETPSRLYLILEFAGGGDLHTRISSGGKLTDLESKIVFAQILSAVKYMHENNIIHRDLK 193
            ::||:|:||...||||:|:|.||::...:...|::.:.|:::.|.||:|||:|.|:..|||||||
  Fly   313 VKLFQVIETEKTLYLIMEYASGGEVFDYLVLHGRMKEKEARVKFRQIVSAVQYCHQKRIIHRDLK 377

Zfish   194 AENVLYTTNGCIKVADFGFSTKVNNRNQALDTFCGSPPYAAPELFKDDSYIGPPVDVWAMGVLLF 258
            |||:|..:...||:||||||.:....:: ||||||||||||||||:...|.||.||||::||:|:
  Fly   378 AENLLLDSELNIKIADFGFSNEFTPGSK-LDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILY 441

Zfish   259 FMVTGSLPFRADTVPKLRQSVLEGAYVLPIWVSAPCQRLIRGILKPEPSERCALDQMLGCEWL-- 321
            .:|:|||||...|:.:||:.||.|.|.:|.::|..|:.|:|..|...|::|.:|:.::|.:|:  
  Fly   442 TLVSGSLPFDGSTLRELRERVLRGKYRIPFYMSTDCENLLRKFLVLNPAKRASLETIMGDKWMNM 506

Zfish   322 -LPVELFRP-IPPLYQLNPIHLLEA------GPGELDRDQEEVKG--------ILEKLGVTPEHI 370
             ...:..:| |.|...|.....:||      ...|::....:|:.        :|.:....||  
  Fly   507 GFEEDELKPYIEPKADLADPKRIEALVAMGYNRSEIEASLSQVRYDDVFATYLLLGRKSTDPE-- 569

Zfish   371 LNNQGKRIRSPINGVYRILLHRVKRNRGAESV--PSISGVVKDPKRDSLRAYRNLRHSS 427
              :.|.|..|.:: :..|..:....|.|:.||  |:..||.:.....|.:..|  |.||
  Fly   570 --SDGSRSGSSLS-LRNISGNDAGANAGSASVQSPTHRGVHRSISASSTKPSR--RASS 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nim1kbXP_001337548.3 STKc_NIM1 66..321 CDD:270977 121/254 (48%)
par-1NP_995894.2 STKc_MARK 252..504 CDD:270974 120/252 (48%)
S_TKc 253..504 CDD:214567 120/251 (48%)
UBA_MARK_Par1 525..563 CDD:270522 5/37 (14%)
MARK1-3_C 839..936 CDD:213381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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