DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GALNT12 and Pgant9

DIOPT Version :9

Sequence 1:NP_078918.3 Gene:GALNT12 / 79695 HGNCID:19877 Length:581 Species:Homo sapiens
Sequence 2:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster


Alignment Length:564 Identity:248/564 - (43%)
Similarity:338/564 - (59%) Gaps:60/564 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    37 LRAQRGAGAGAAEPGPPRTPRPGRREPVMPRPPVPAN---ALGARGEAVRL--QLQGEELRLQEE 96
            |:|:|.....|.:  |.:.|:...::.:.|    |||   ..|..|:.|||  ::..|..:..::
  Fly   111 LQAERMRKKAAEQ--PKKKPQEDSKKVIDP----PANFEENPGELGKPVRLPKEMSDEMKKAVDD 169

Human    97 SVRLHQINIYLSDRISLHRRLPERWNPLCKEKKYDYDNLPRTSVIIAFYNEAWSTLLRTVYSVLE 161
            ....:..|.|:||.||:||.||:..:..||::.....|||:|.|||.|:||||:.|||||:|||:
  Fly   170 GWTKNAFNQYVSDLISVHRTLPDPRDAWCKDEARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLD 234

Human   162 TSPDILLEEVILVDDYSDREHLKERLANELSGLPKVRLIRANKREGLVRARLLGASAARGDVLTF 226
            .||:.|:.::||||||||..|||.:|.:..:..|||::||..|||||:|||:|||:.|:..|||:
  Fly   235 RSPEHLIGKIILVDDYSDMPHLKRQLEDYFAAYPKVQIIRGQKREGLIRARILGANHAKSPVLTY 299

Human   227 LDCHCECHEGWLEPLLQRIHEEESAVVCPVIDVIDWNTFEY-LGNSGEPQIGGFDWRLVFTWHTV 290
            ||.||||.||||||||.||....:.|||||||||...|.|| ..:||...:|||||.|.|:||.|
  Fly   300 LDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHPV 364

Human   291 PERERIRMQSPVDVIRSPTMAGGLFAVSKKYFEYLGSYDTGMEVWGGENLEFSFRIWQCGGVLET 355
            |||||.|..|..:.:.|||||||||::.:::|:.||:||:|.::|||||||.||:.|.|||.||.
  Fly   365 PERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEI 429

Human   356 HPCSHVGHVFPKQAPY----SRNKALANSVRAAEVWMDEFKELYYHR--NPRARLEPFGDVTERK 414
            .|||||||:|.|::||    ..|....||||.|||||||:.:.||||  |.:.   .:|||::|:
  Fly   430 VPCSHVGHIFRKRSPYKWRSGVNVLKKNSVRLAEVWMDEYSQYYYHRIGNDKG---DWGDVSDRR 491

Human   415 QLRDKLQCKDFKWFLETVYPELHVPEDRPGFFGMLQNKGLTDY----CFDYNPPDENQ--IVGHQ 473
            :||:.|:||.|||:|:.:||||.:|.|... .|.::|.|   |    |.|.....::|  .||  
  Fly   492 KLRNDLKCKSFKWYLDNIYPELFIPGDSVA-HGEIRNLG---YGGRTCLDAPAGKKHQKKAVG-- 550

Human   474 VILYLCHGMGQNQFFEYTSQKEIRYNTHQPEGCIAVEAGMDTLIMHLCEE-------TAPENQKF 531
              .|.||..|.||::..:...|||    :.:.|:.. ||.|..:.. |..       |..||.| 
  Fly   551 --TYPCHRQGGNQYWMLSKAGEIR----RDDSCLDY-AGKDVTLFG-CHGGKGNQFWTYRENTK- 606

Human   532 ILQEDGSLFHEQSKKCVQAARKESSDSFVPLLRDCTNS-DHQKW 574
                  .|.|..|.||:  |..||.|..  |:.:|:.| ..|:|
  Fly   607 ------QLHHGTSGKCL--AISESKDKL--LMEECSASLSRQQW 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GALNT12NP_078918.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 43..67 3/23 (13%)
WcaA 134..429 CDD:223539 172/301 (57%)
Catalytic subdomain A 135..244 68/108 (63%)
pp-GalNAc-T 139..433 CDD:133004 169/300 (56%)
Catalytic subdomain B 304..366 37/61 (61%)
Ricin_B_lectin 445..574 CDD:279046 40/142 (28%)
RICIN 447..576 CDD:238092 41/142 (29%)
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 159/270 (59%)
pp-GalNAc-T 213..510 CDD:133004 169/299 (57%)
Ricin_B_lectin 521..640 CDD:279046 40/143 (28%)
RICIN 523..642 CDD:238092 41/142 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152449
Domainoid 1 1.000 223 1.000 Domainoid score I2581
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.721928 Normalized mean entropy S3838
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D153577at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
76.700

Return to query results.
Submit another query.