DRSC/TRiP Functional Genomics Resources

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Protein Alignment ROGDI and RAV2

DIOPT Version :10

Sequence 1:XP_006721010.1 Gene:ROGDI / 79641 HGNCID:29478 Length:294 Species:Homo sapiens
Sequence 2:NP_010488.1 Gene:RAV2 / 851784 SGDID:S000002610 Length:351 Species:Saccharomyces cerevisiae


Alignment Length:210 Identity:40/210 - (19%)
Similarity:78/210 - (37%) Gaps:33/210 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    17 EEFRWLLHDEVHAVLKQLQD------ILKEASLRFTLP-GSGTEGPAKQENFILGSCGTDQVKGV 74
            :|..||:.:.|...|..:.|      .:.|:...|.:| .:|....:.::|      .:..||||
Yeast    25 KECSWLIEEIVKPQLPNIIDNFSKCLEMLESDQIFKMPVSNGIPNESNKQN------DSPTVKGV 83

Human    75 LTLQGDALSQADVNLKMP---RNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLLTSRDQSYQF 136
            :|.||..:....:.::.|   |..|:: |.......:.|.|......|:...:.:|.      |.
Yeast    84 ITRQGQYIVDFHIVVRFPQFQRGKQVM-FRMNTGLNFLLIQFSKIMTHLKNILEILN------QL 141

Human   137 KTGAEVLKLMDAVMLQLTRARNRL----TTPATLTLPEIAASGLTRMF------APALPSDLLVN 191
            :...:|.:.:....:.:....:.|    ..|..|..||.....:..||      ..:....|.:.
Yeast   142 QVATDVSEFVSKFGVAMELLNHSLILLQNPPRDLVFPEDNNFAMKEMFQDCYSVCESTAHILGLE 206

Human   192 VYINLNKLCLTVYQL 206
            :.:..|:||:.:..|
Yeast   207 LTLCRNELCIELRNL 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ROGDIXP_006721010.1 Rogdi_lz 18..283 CDD:463031 40/209 (19%)
RAV2NP_010488.1 Rogdi_lz 26..341 CDD:463031 40/209 (19%)

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