DRSC/TRiP Functional Genomics Resources

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Protein Alignment ROGDI and rogdi

DIOPT Version :10

Sequence 1:XP_006721010.1 Gene:ROGDI / 79641 HGNCID:29478 Length:294 Species:Homo sapiens
Sequence 2:XP_002941090.1 Gene:rogdi / 779520 XenbaseID:XB-GENE-958855 Length:288 Species:Xenopus tropicalis


Alignment Length:295 Identity:227/295 - (76%)
Similarity:258/295 - (87%) Gaps:8/295 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATVMA-ATAAERAVLEEEFRWLLHDEVHAVLKQLQDILKEASLRFTLPGSGTEGPAKQENFILG 64
            |||..| |::.||:||||||:|||.:|||:|||||||||||||.||||||...|||.|||||.||
 Frog     1 MATAAASASSTERSVLEEEFKWLLKEEVHSVLKQLQDILKEASRRFTLPGGVGEGPTKQENFALG 65

Human    65 SCGTDQVKGVLTLQGDALSQADVNLKMPRNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLLTS 129
            :..:|||||:||||||.|.||:||||..|.|||||||||||||||:||||||||||:|||||||:
 Frog    66 TTSSDQVKGILTLQGDTLCQAEVNLKTLRTNQLLHFAFREDKQWKMQQIQDARNHVNQAIYLLTN 130

Human   130 RDQSYQFKTGAEVLKLMDAVMLQLTRARNRLTTPATLTLPEIAASGLTRMFAPALPSDLLVNVYI 194
            |.::|.|:||||||||||||||||||||||||||||:||||:|.||||:||.||||.|:|:|.|:
 Frog   131 RGENYTFQTGAEVLKLMDAVMLQLTRARNRLTTPATMTLPEVATSGLTKMFTPALPPDILLNFYV 195

Human   195 NLNKLCLTVYQLHALQPNSTKNFRPAGGAVLHSPGAMLDPLTAHSEWGSQRLEVSHVHKVECVIP 259
            |:|||||.|||||||||||||||||:|.||||:||||.       |..:||.|||||||||||:|
 Frog   196 NVNKLCLLVYQLHALQPNSTKNFRPSGSAVLHNPGAMF-------ELNNQRFEVSHVHKVECVVP 253

Human   260 WLNDALVYFTVSLQLCQQLKDKISVFSSYWSYRPF 294
            |||||||:||||||||||||||||||||||::||:
 Frog   254 WLNDALVFFTVSLQLCQQLKDKISVFSSYWNFRPY 288

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ROGDIXP_006721010.1 Rogdi_lz 18..283 CDD:463031 206/264 (78%)
rogdiXP_002941090.1 Rogdi_lz 19..277 CDD:463031 206/264 (78%)

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