DRSC/TRiP Functional Genomics Resources

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Protein Alignment ROGDI and Rogdi

DIOPT Version :10

Sequence 1:XP_006721010.1 Gene:ROGDI / 79641 HGNCID:29478 Length:294 Species:Homo sapiens
Sequence 2:NP_001020035.1 Gene:Rogdi / 287061 RGDID:1560021 Length:287 Species:Rattus norvegicus


Alignment Length:294 Identity:273/294 - (92%)
Similarity:277/294 - (94%) Gaps:7/294 - (2%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATVMAATAAERAVLEEEFRWLLHDEVHAVLKQLQDILKEASLRFTLPGSGTEGPAKQENFILGS 65
            |||.|||:||||||||||||||||.||||||:|||||||||||||||||..||||||||||||||
  Rat     1 MATAMAASAAERAVLEEEFRWLLHAEVHAVLRQLQDILKEASLRFTLPGPSTEGPAKQENFILGS 65

Human    66 CGTDQVKGVLTLQGDALSQADVNLKMPRNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLLTSR 130
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.:|
  Rat    66 CGTDQVKGVLTLQGDALSQADVNLKMPRNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLLANR 130

Human   131 DQSYQFKTGAEVLKLMDAVMLQLTRARNRLTTPATLTLPEIAASGLTRMFAPALPSDLLVNVYIN 195
            |:||||||||||||||||||||||||||||||||||||||||||||||||||.||||||||||||
  Rat   131 DESYQFKTGAEVLKLMDAVMLQLTRARNRLTTPATLTLPEIAASGLTRMFAPTLPSDLLVNVYIN 195

Human   196 LNKLCLTVYQLHALQPNSTKNFRPAGGAVLHSPGAMLDPLTAHSEWGSQRLEVSHVHKVECVIPW 260
            ||||||||||||.|||.|||||||||||||||||||.       |||||||||||||||||||||
  Rat   196 LNKLCLTVYQLHTLQPTSTKNFRPAGGAVLHSPGAMF-------EWGSQRLEVSHVHKVECVIPW 253

Human   261 LNDALVYFTVSLQLCQQLKDKISVFSSYWSYRPF 294
            ||||||||||||||||||||||||||||||.|||
  Rat   254 LNDALVYFTVSLQLCQQLKDKISVFSSYWSSRPF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ROGDIXP_006721010.1 Rogdi_lz 18..283 CDD:463031 246/264 (93%)
RogdiNP_001020035.1 Rogdi_lz 18..276 CDD:463031 246/264 (93%)

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