DRSC/TRiP Functional Genomics Resources

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Protein Alignment ROGDI and rav2

DIOPT Version :10

Sequence 1:XP_006721010.1 Gene:ROGDI / 79641 HGNCID:29478 Length:294 Species:Homo sapiens
Sequence 2:NP_595763.1 Gene:rav2 / 2541012 PomBaseID:SPBC3H7.12 Length:287 Species:Schizosaccharomyces pombe


Alignment Length:313 Identity:65/313 - (20%)
Similarity:122/313 - (38%) Gaps:78/313 - (24%)


- Green bases have known domain annotations that are detailed below.


Human     8 TAAERAVLEEEFRWLLHDEVHAVLKQLQDILKEASLRFTLPGSGTEGPAKQENFILGSCGTDQVK 72
            |..:.:|:.:|..||..:.:....:.:.:.||||     |....::.|..   .:..|..||.||
pombe     3 TEIDASVIVKEKEWLETNVLPEFWESMSEGLKEA-----LNLISSDDPTV---LVFTSPKTDAVK 59

Human    73 GVLTLQGDALSQADVNLKMPRNNQLLHFAFREDKQWKLQQIQDARNHVSQAIYLL------TSRD 131
            |:::.....:.:.:|..|:.|...:|  ..::.....|.||.:..|::..|:|.|      |.| 
pombe    60 GIVSRSSSNVVRVNVTAKVGRTTHVL--KLKDSAIIHLDQILNLSNYMHYALYCLPRLRHNTER- 121

Human   132 QSYQFKTGAEVLK----LMDAVMLQLTRARNRLTTPATLTLP---------------------EI 171
               ..|...|:|.    |:.::|.:.:......:..::::|.                     :|
pombe   122 ---AIKELQEILHAIVCLLHSIMQEESEKEEIPSNASSISLKSQNSIVSRTSNPFSCLNHSPRQI 183

Human   172 AASGLTRMFAPALPSDLLVNVYINLNKLCLTVYQLHALQPNSTKNFRPAGGAVLHSPG------A 230
            ..:....:|:|.|||:|.::..|:...:||.:::|..  ||.          ||.|..      .
pombe   184 HKTVRNHLFSPPLPSNLALSFSISNASVCLHLFRLSG--PNE----------VLESFAKNSVDIE 236

Human   231 MLDPLTAHSEWGSQRLE--------VSHVHKVECVIPWLNDALVYF-TVSLQL 274
            ||.|..      |||::        ::...|:..:...:||....| |:|..|
pombe   237 MLKPFV------SQRIDAFSQDPILLAVTAKLSALQKKVNDVSYRFKTISSSL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ROGDIXP_006721010.1 Rogdi_lz 18..283 CDD:463031 63/303 (21%)
rav2NP_595763.1 Rogdi_lz 13..269 CDD:463031 57/287 (20%)

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