DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF128 and SPAC57A7.09

DIOPT Version :9

Sequence 1:NP_919445.1 Gene:RNF128 / 79589 HGNCID:21153 Length:428 Species:Homo sapiens
Sequence 2:NP_593372.1 Gene:SPAC57A7.09 / 2542187 PomBaseID:SPAC57A7.09 Length:372 Species:Schizosaccharomyces pombe


Alignment Length:346 Identity:72/346 - (20%)
Similarity:134/346 - (38%) Gaps:85/346 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    43 WTAYLNVSWRVPHTGVNRTVWELSEEGVYGQ---DSPLEPVAGVLVPPDGPGALNACNPHTNFTV 104
            :.|..:|:.::|...|  |:|  |.:.|:|:   ::....|..:.:|.:....::.| |:.|.|.
pombe    39 FAASTDVAIQLPDRNV--TLW--SRQAVFGKHFTNASATTVINLYLPSNFQEDMSGC-PNRNDTD 98

Human   105 PTVW----------------------GSTVQ-----------VSWLALIQRGGGCTFADKIHLAY 136
            .:.:                      .:.||           :....|:|| |.||:.||...|.
pombe    99 ASYFYENDIIDYDIEYIEQKSYSSKPSARVQKDDGGESKDEAILDFLLVQR-GKCTYFDKALEAQ 162

Human   137 ERGASGAVI-FNFPGTRNEVIPMSHPGAVD-----IVAIMIG----NLKGTKILQSIQRGIQV-T 190
            ..|..|.:: .|...:...:..|..|..||     |.::.:.    ||..:.:|.|.::.::: .
pombe   163 RLGFKGVIVGDNRSPSSFRLHYMVAPDKVDESKVHIPSLFVSTSSYNLLWSDLLHSYRQPLKLYA 227

Human   191 MVIEVGKKHGPWVNHYS---IFFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLKADAK 252
            ...|:|....|::..:|   |..::|.     |..:..||       |..|.:|:.:|.::....
pombe   228 KPEELGDMFWPFLLCFSPSIIMLITVQ-----ALAIRKFI-------RTYRTKSKTRRFIEDLPS 280

Human   253 KAIGRL----------------QLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHK 301
            :.|.|.                :|..|..........|..|.:|:|.:...|.|..|.|.|.||:
pombe   281 RTISREGFYSEEEEIENSTQNGELVPLMDESTRRATFGVECVICLESFTKGDKVVALPCKHEFHR 345

Human   302 TCVDPWLLEHR-TCPMCKCDI 321
            .|:..|::::| .||.|..::
pombe   346 PCIAKWIVDYRHACPTCNTEV 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF128NP_919445.1 PA_GRAIL_like 48..193 CDD:239037 37/191 (19%)
RING-H2_RNF128_like 275..323 CDD:319716 16/48 (33%)
RING-H2 finger (C3H2C3-type) 277..317 CDD:319716 15/40 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 346..428
SPAC57A7.09NP_593372.1 COG5540 1..369 CDD:227827 72/346 (21%)
Peptidases_S8_S53 <144..211 CDD:299169 18/67 (27%)
zf-RING_2 320..362 CDD:290367 15/41 (37%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4628
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm53615
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.810

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