DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CORO7 and pod1

DIOPT Version :10

Sequence 1:NP_078811.3 Gene:CORO7 / 79585 HGNCID:26161 Length:925 Species:Homo sapiens
Sequence 2:NP_001245554.1 Gene:pod1 / 31620 FlyBaseID:FBgn0029903 Length:1266 Species:Drosophila melanogaster


Alignment Length:1267 Identity:384/1267 - (30%)
Similarity:567/1267 - (44%) Gaps:351/1267 - (27%)


- Green bases have known domain annotations that are detailed below.


Human     3 RFRVSKFRHTEARPPRRESWISDIRAGTAPSCRNHIKSSCSLIAFNSDRPG-VLGIVPLQGQGED 66
            ||:.||:::.....|:.|:.:.:|..|:..:..|:|.:|.:.:|||.:..| .:.::||...|..
  Fly     4 RFKASKYKNAAPIVPKAEACVREICVGSYQTYGNNIAASGAFMAFNWEHTGSSVAVLPLDDCGRK 68

Human    67 KRRVAHLGCHSDLVTDLDFSPFDDFLLATGSADRTVKLWRLPGPG--QALPSAPGVVLGPEDLPV 129
            .:.:..|..|:|.||||.||||.|.||||.|.|..||:|.:|..|  |:| |.|..:...:...|
  Fly    69 SKTMPLLHGHTDTVTDLKFSPFHDGLLATASQDCLVKIWHIPEKGLEQSL-SDPEAIFSHKQRRV 132

Human   130 EVLQFHPTSDGILVSAAGTTVKVWDAAKQQPLTELAAHGDLVQSAVWSRDGALVGTACKDKQLRI 194
            |.:.||||:||::.|.|...|.::|.:.|:.:.....|.:::|||.|..||:::.|:||||.:||
  Fly   133 ETVGFHPTADGLMYSTAAGCVALFDLSTQKEIFSNNEHPEVIQSASWREDGSVLATSCKDKNVRI 197

Human   195 FDPRTKPRASQST-QAHENSRDSRLAWMGTWEHLVSTGFNQMREREVKLWDTRFFSSALASLTLD 258
            ||||......|.| ::|::.:|||:.|:|....:::|||:..|.|:|.:.|.|.|::...:|.||
  Fly   198 FDPRAAGSPIQLTAESHQSIKDSRVVWLGNQHRILTTGFDAARLRQVIIRDVRNFNTPEKTLELD 262

Human   259 TSLGCLVPLLDPDSGLLVLAGKGERQLYCYEVVPQQPALSPVTQCVLESVLRGAALVPRQALAVM 323
            .|.|.|:||.|||:.:|.|||||:..:...|:..:.|.|....:...|.. :||.|||::||.||
  Fly   263 CSTGILMPLFDPDTNMLFLAGKGDTTINYLEITDKDPYLIEGLRHTGEQT-KGACLVPKRALKVM 326

Human   324 SCEVLRVLQLSDTAIVPIGYHVPRKAV-EFHEDLFPDTAGCVPATDPHSWWAGDNQQVQKVSLNP 387
            ..||.|||||:...::||.|.||||.. :||.||:|:|.|.........|..|.||.|.|:||:|
  Fly   327 EAEVNRVLQLTSNMVIPIMYQVPRKTYRDFHADLYPETTGYKTELVAGEWLNGSNQAVPKMSLDP 391

Human   388 ACRPH------------------------------------------------------------ 392
            |.|.|                                                            
  Fly   392 AKREHGDEPIIIHRGNLSDFVKNLENQRAKSNTTGKPNQQAKRNDNEHFVMLNTGNNFEEKNGND 456

Human   393 -----------PSFT------SCLV---------------------------------------- 400
                       ||.:      |.|:                                        
  Fly   457 NSNESNGKKSTPSQSQPDGECSELIRKFEAKYKVDSEKEKAHAYAQSHEDDKESPTEHEHSTGSS 521

Human   401 ------------------PPAEPLPDTAQ------------------------------------ 411
                              .|.:|:|.|::                                    
  Fly   522 EEVSSSGGLDNHSASGSHSPPKPMPRTSRSNSLPEASDSAGESSSTNTPRPRPRTTAASAYKPRL 586

Human   412 -PAVMETPVGDADASEGFSSP-------------------------------------------- 431
             |....:..||....:.|:.|                                            
  Fly   587 GPKPFSSTTGDVSFDKVFAVPLAPGSHENISNVGQDSGVEMTPAQGAKPDLIVEIEIKKKHEREP 651

Human   432 -------PSSLTS---------------------------------------------------- 437
                   ..|||:                                                    
  Fly   652 AVSGNGVQKSLTTSERRKSSADDDESSDKIFEQNSESSENSTEGEDRTDADLRRNCTSRSSFAER 716

Human   438 ---------------PSTPSSL------------------------------------------- 444
                           |.:|..|                                           
  Fly   717 RRIYENRSKSQVDEKPQSPVPLRREHSKVEPLKPNQQQQQQGNVIDTKRISVPEGKLMEEHRRGN 781

Human   445 --GPSLSSTSGIGTSPSLRSLQSLLGPSSKFRHAQGTVLHRDSHITNLKGLNLTTPGESDGFCAN 507
              |...|:|....::.|.:...::.|..|||||.:||..|:.:||.||:.|:...|||.:||.||
  Fly   782 GAGLKKSATEAAFSAASTKRTSTVFGKVSKFRHLKGTPGHKSTHIENLRNLSRQIPGECNGFHAN 846

Human   508 KLRVAVPLLSSGGQVAVLELRKPGRLPDTALPTLQNGAAVTDLAWDPFDPHRLAVAGEDARIRLW 572
            :.||||||...||::|:.||.:||||||..:|:|.||:.:.|..|||||..|||||.:|..:::|
  Fly   847 QERVAVPLSGPGGKIAIFELSRPGRLPDGVIPSLVNGSNIMDFQWDPFDAQRLAVACDDGIVKIW 911

Human   573 RVPAEGLEEVLTTPETVLTGHTEKICSLRFHPLAANVLASSSYDLTVRIWDLQAGADRLKLQGHQ 637
            .:.|.||.|...||...||.|.:||..:|||||||:||.::|||:|:::|||:...::..|.||.
  Fly   912 HIEAGGLSEPTNTPAGELTAHLDKIYFIRFHPLAADVLLTASYDMTIKLWDLRTMTEKCSLSGHT 976

Human   638 DQIFSLAWSPDGQQLATVCKDGRVRVYRPRSGPEPLQEGPGPKGGRGARIVWVCDGRCLLVSGFD 702
            ||||..||||.|:..|||||||::|||.||....|::||.||.|.|||||.|..:|..::.:|||
  Fly   977 DQIFDFAWSPCGRLGATVCKDGKIRVYNPRKSETPIREGNGPVGTRGARITWALEGHYIVCTGFD 1041

Human   703 SQSERQLLLYEAEALAGGPLAVLGLDVAPSTLLPSYDPDTGLVLLTGKGDTRVFLYELLPESPFF 767
            ..||||:.:|.|:.|: .||....|||:||.|:|.||.|:..:.:|||||:.::.||:..|.|:.
  Fly  1042 KVSERQISVYNAQKLS-APLNTASLDVSPSILIPFYDEDSSTLFVTGKGDSTIYCYEITDEEPYI 1105

Human   768 LECNSFTSPDPHKGLVLLPKTECDVREVELMRCLRLRQSSLEPVAFRLPRVRKEFFQDDVFPDTA 832
            ...:.......|:||..|.|..|||..||..:..||..:::||::|.:||::.|.||||:||.|.
  Fly  1106 CPLSHHRCTSLHQGLSFLTKNHCDVASVEFSKAYRLTNTTIEPLSFTVPRIKSELFQDDLFPPTR 1170

Human   833 VIWEPVLSAEAWLQGANGQPWLLSLQPPDM---SPVSQAPREAPARRAPSSAQYLEEKSDQQ--K 892
            :.|...||:|.|....:.....:||:|..|   |.:.|.|.: |.:: |...|:..:||:.:  |
  Fly  1171 ITWSATLSSEDWFASNDKAAPKVSLKPEGMETLSSIQQVPAQ-PVKK-PDHPQFGGQKSEYEINK 1233

Human   893 KEELLNAMVAKLGNREDPLPQDSFEGVDEDEW 924
            ::|:..::.|:: .....|.||..|||||:||
  Fly  1234 QQEIQKSVSARM-EFTTKLEQDDMEGVDENEW 1264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CORO7NP_078811.3 WD40 6..428 CDD:475233 165/598 (28%)
WD 1 75..115 23/41 (56%)
WD40 repeat 81..124 CDD:293791 23/44 (52%)
WD 2 124..163 13/38 (34%)
WD40 repeat 129..165 CDD:293791 13/35 (37%)
WD 3 166..205 18/38 (47%)
WD40 repeat 172..208 CDD:293791 19/36 (53%)
WD 4 209..253 15/43 (35%)
WD40 repeat 215..256 CDD:293791 14/40 (35%)
WD40 repeat 263..302 CDD:293791 15/38 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 419..461 14/204 (7%)
WD40 471..880 CDD:475233 188/411 (46%)
WD40 repeat 504..540 CDD:293791 20/35 (57%)
WD 5 542..582 18/39 (46%)
WD40 repeat 547..591 CDD:293791 19/43 (44%)
WD 6 592..632 19/39 (49%)
WD40 repeat 598..634 CDD:293791 16/35 (46%)
WD 7 635..674 24/38 (63%)
WD40 repeat 640..677 CDD:293791 21/36 (58%)
WD 8 728..768 18/39 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 858..925 23/72 (32%)
pod1NP_001245554.1 DUF1899 3..67 CDD:462645 17/62 (27%)
WD40 37..>389 CDD:475233 142/353 (40%)
WD40 repeat 83..127 CDD:293791 23/44 (52%)
WD40 repeat 132..166 CDD:293791 13/33 (39%)
WD40 repeat 174..210 CDD:293791 18/35 (51%)
WD40 repeat 217..260 CDD:293791 14/42 (33%)
WD40 repeat 267..294 CDD:293791 12/26 (46%)
WD40 809..>1193 CDD:475233 179/384 (47%)
WD40 repeat 884..923 CDD:293791 17/38 (45%)
WD40 repeat 937..973 CDD:293791 16/35 (46%)
WD40 repeat 979..1016 CDD:293791 21/36 (58%)
WD40 repeat 1024..1064 CDD:293791 17/40 (43%)
WD40 repeat 1071..1094 CDD:293791 10/22 (45%)

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