DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDC73 and CG6220

DIOPT Version :10

Sequence 1:NP_078805.3 Gene:CDC73 / 79577 HGNCID:16783 Length:531 Species:Homo sapiens
Sequence 2:NP_610897.1 Gene:CG6220 / 36520 FlyBaseID:FBgn0033865 Length:359 Species:Drosophila melanogaster


Alignment Length:396 Identity:120/396 - (30%)
Similarity:190/396 - (47%) Gaps:79/396 - (19%)


- Green bases have known domain annotations that are detailed below.


Human   170 IRSLSEAMSVEKIAAIKAKIMAKKRSTIKTDLDDDITAL---KQRSFVDAEVDVTRDIVSRERVW 231
            :::|:|.|:||.||.||||.:|.|:|..|..:  .:.|.   |.|:..:.:.::.|..:.|||..
  Fly     5 LKTLTETMTVEAIAIIKAKRLAMKQSVDKNAM--QMRAQEREKGRNLDNMQKELGRRAMKRERPC 67

Human   232 RTRTTILQSTGKNFSKNIFAILQSVKARE-------------EGRAPE----QRPAPNAAPVDPT 279
            |.           |.:.:....:...|:|             :...||    :.|.|      |.
  Fly    68 RV-----------FEEQLLGEKEMTTAQEYLKLAHHSMMRSLDSTVPELSQLEMPPP------PE 115

Human   280 LRTKQPIP-AAYNRYDQERF-KGKEE----TEGFKIDTMGTYHGMTLKSVTEGASARKTQTPAAQ 338
            :.|:.|.| ..||||.||:| |.::|    .:|..::...|:|        |....::.::.:.:
  Fly   116 IMTEPPWPKTKYNRYGQEKFLKAQQEFGINPQGSNLENCATFH--------ESQKDKRNRSVSRE 172

Human   339 PVPRPVSQARPPPNQKKGSRTPIIIIPAATTSLITMLNAKDLLQDLKFVPSDEKKKQGCQ----- 398
            .:.|..|.::...:.|..:|.|||::|.|.||:|::.|.|.||::|.:.|    ::.|.|     
  Fly   173 SIERSRSNSKDRRSSKLYARMPIIVVPDAMTSMISLNNIKTLLEELHYEP----ERNGRQSNPPE 233

Human   399 -RENETLIQRR-KDQMQPGGTAISVTVPYRVVDQPLKLMPQDWDRVVAVFVQGPAWQFKGWPWLL 461
             |..|.:::.| ::::          |.|||:|....|.|.:||||||||..||.||||||    
  Fly   234 CRPKEVIVEHRFQNEL----------VSYRVIDNVTNLTPVEWDRVVAVFAMGPKWQFKGW---- 284

Human   462 PDGS-PVDIFAKIKAFHLKYDEVRLDPNVQKWDVTVLELSYHKRHLDRPVFLRFWETLDRYMVKH 525
            |||: |..||.|:.||||.:....:.|.:.|..|..|.||..:||.|..:.:.||..:||:|..|
  Fly   285 PDGADPAAIFHKVCAFHLHFRNTPMCPELTKLQVHSLALSPTERHSDSGIIMEFWNRVDRHMAVH 349

Human   526 KSHLRF 531
            .....|
  Fly   350 ARQFAF 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDC73NP_078805.3 CDC73_N 1..297 CDD:464994 39/147 (27%)
Nuclear localization signal 125..139
Interaction with POLR2A and PAF1 200..531 104/364 (29%)
Interaction with CTNNB1. /evidence=ECO:0000269|PubMed:16630820 200..250 9/52 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 260..292 10/49 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 325..358 4/32 (13%)
CDC73_C 357..520 CDD:461570 65/170 (38%)
CG6220NP_610897.1 CDC73_N <5..134 CDD:464994 39/147 (27%)
CDC73_C 190..344 CDD:461570 65/171 (38%)
Blue background indicates that the domain is not in the aligned region.

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