Sequence 1: | XP_008766103.1 | Gene: | Myh10 / 79433 | RGDID: | 71000 | Length: | 2007 | Species: | Rattus norvegicus |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001162991.1 | Gene: | Mhc / 35007 | FlyBaseID: | FBgn0264695 | Length: | 1962 | Species: | Drosophila melanogaster |
Alignment Length: | 1981 | Identity: | 786/1981 - (39%) |
---|---|---|---|
Similarity: | 1194/1981 - (60%) | Gaps: | 91/1981 - (4%) |
- Green bases have known domain annotations that are detailed below.
Rat 8 EDPERYLFV-------DRAVIYNPATQADWTAKKLVWIPSERHGFEAASIKEERGDEVMVELAEN 65
Rat 66 GKKAMVNKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKN 130
Rat 131 LPIYSENIIEMYRGKKRHEMPPHIYAISESAYRCMLQDREDQSILCTGESGAGKTENTKKVIQYL 195
Rat 196 AHVASSHKGRKDHNIPQESPKPVKPQGELERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINF 260
Rat 261 DVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKS-DLLLEGFNNYRFLSNGY 324
Rat 325 IPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGNISFKKERNTDQASMPENTVAQ 389
Rat 390 KLCHLLGMNVMEFTRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKAL 454
Rat 455 DRTKRQGASFIGILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFI 519
Rat 520 DFGLDLQPCIDLIERPANPPGVLALLDEECWFPKATDKTFVEKLVQEQ-GSHSKFQKPRQLK--- 580
Rat 581 DKADFCIIHYAGKVDYKADEWLMKNMDPLNDNVATLLHQSSDRFVAELWKDEIQNIQRASFYDSV 645
Rat 646 SGLHEPPVDRIVGLDQVTGMTETAFGSAYKTKKGMFRTVGQLYKESLTKLMATLRNTNPNFVRCI 710
Rat 711 IPNHEKRAGKLDPHLVLDQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGK 775
Rat 776 QACERMIRALELDPNLYRIGQSKIFFRAGVLAHLEEERDLKITDIIIFFQAVCRGYLARKAFAKK 840
Rat 841 QQQLSALKVLQRNCAAYLKLRHWQWWRVFTKVKPLLQVTRQEEELQAKDEELLKVKE---KQTKV 902
Rat 903 EGELEEMERKHQQLLEEKNILAEQLQAETELFAEAEEMRARLAAKKQELEEILHDLESRV-EEEE 966
Rat 967 ERNQILQNEKKKMQAHIQDLEEQLDEEEGARQKLQLEKVTAEAKIKKMEEEVLLLEDQNSKFIKE 1031
Rat 1032 KKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKKEEKTRQELEKAKRKLDGETT 1096
Rat 1097 DLQDQIAELQAQVDELKVQLTKKEEELQGALARGDDETLHKNNALKVARELQAQIAELQEDFESE 1161
Rat 1162 KASRNKAEKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAELKKALEDETKNHEAQIQ 1226
Rat 1227 DMRQRHATALEELSEQLEQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQ 1291
Rat 1292 VQELHAKVSEGDRLRVELAEKANKLQNELDNVSTLLEEAEKKGMKFAKDAAGLESQLQDTQELLQ 1356
Rat 1357 EETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIEG 1420
Rat 1421 LEEAKKKL---LKDVEALSQRLEEKVLAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQK 1482
Rat 1483 KFDQLLAEEKGISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDL 1547
Rat 1548 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQ 1612
Rat 1613 TRDEQNEEKKRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQ 1677
Rat 1678 LRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERD 1742
Rat 1743 ELAD--EIANSASGKSALLD-EKRRLEARIAQLEEELEE---EQSNMELLNDRFRKTTLQVDTLN 1801
Rat 1802 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAK 1866
Rat 1867 ERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASR 1931
Rat 1932 RKLQRELDDATEANEGLSREVSTLKNRLRRG 1962 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Myh10 | XP_008766103.1 | Myosin_N | 34..72 | CDD:280832 | 14/37 (38%) |
Myosin_head | 87..802 | CDD:278492 | 346/719 (48%) | ||
MYSc_Myh10 | 99..802 | CDD:276952 | 339/707 (48%) | ||
Myosin_tail_1 | 879..1959 | CDD:279860 | 364/1093 (33%) | ||
DUF2317 | <1142..1253 | CDD:302887 | 47/110 (43%) | ||
ApoLp-III_like | 1224..1371 | CDD:304399 | 42/146 (29%) | ||
GBP_C | <1535..1641 | CDD:303769 | 31/105 (30%) | ||
coiled coil | 1631..1641 | CDD:293879 | 4/9 (44%) | ||
DUF106 | <1676..>1727 | CDD:303007 | 16/50 (32%) | ||
DUF2570 | 1800..>1898 | CDD:305162 | 35/97 (36%) | ||
Mhc | NP_001162991.1 | Myosin_N | 36..73 | CDD:280832 | 14/37 (38%) |
MYSc | 81..777 | CDD:214580 | 360/738 (49%) | ||
MYSc_Myh1_insects_crustaceans | 100..765 | CDD:276874 | 339/707 (48%) | ||
Myosin_tail_1 | 842..1897 | CDD:279860 | 356/1067 (33%) | ||
V_Alix_like | 1557..1877 | CDD:187408 | 104/325 (32%) | ||
ATP-synt_B | <1671..1771 | CDD:304375 | 33/105 (31%) | ||
TMPIT | 1739..>1825 | CDD:285135 | 29/88 (33%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0161 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D47111at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000014 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100110 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X58 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.720 |