DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TFEB and tfeb

DIOPT Version :9

Sequence 1:NP_001161299.2 Gene:TFEB / 7942 HGNCID:11753 Length:490 Species:Homo sapiens
Sequence 2:NP_001244121.1 Gene:tfeb / 562289 ZFINID:ZDB-GENE-090807-3 Length:493 Species:Danio rerio


Alignment Length:509 Identity:284/509 - (55%)
Similarity:348/509 - (68%) Gaps:51/509 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    15 MASRIGLRMQLMREQAQQEEQRERMQQQAV-MHYMQQQQQQQQQQLGGP--PTPAINTPVHFQSP 76
            |:||||||:||||:|.||||||||.||||| ||||       |.::.||  |||||:.|.|||.|
Zfish     1 MSSRIGLRLQLMRDQMQQEEQRERQQQQAVSMHYM-------QHRMPGPPEPTPAISAPTHFQGP 58

Human    77 PPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPPPAA------ 135
            ..||.||||||::|||||.||::|||.|:|:||||.||..|.|.|...:...|.|||..      
Zfish    59 MQVPVEVLKVQTHLENPTDYHIRQSQRQQVKEYLSTTYATKQAVHAVTSLVQPSPPPMVQAQTGS 123

Human   136 ------SPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDNIMRL----DDVLGYINP 190
                  ||.:|. ..|.:||||||||||||||:|.|:.|.|:||:||||:.|    ||:..|.:|
Zfish   124 APPNMHSPCMRT-EQLMNSAGNSAPNSPMAMLNISSSHENEMDDLIDNIISLQSSYDDIQAYNDP 187

Human   191 EMQMPNTLPLSSSHLNVYSSDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHN 255
            .:|||||||||||||:||:. |.::.|.:.:||:||||:|..||||:|.|:||:|||||||||||
Zfish   188 VVQMPNTLPLSSSHLDVYTG-PGMSGSAIAMTSNSCPANLAIKRELSDVEARAMAKERQKKDNHN 251

Human   256 LIERRRRFNINDRIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLE 320
            ||||||||||||||||||.:|||.|||||||||||||:||||||:|||||:|::||:||:.||:|
Zfish   252 LIERRRRFNINDRIKELGTMIPKTNDLDVRWNKGTILRASVDYIKRMQKDVQRTREVENNFRRME 316

Human   321 MTNKQLWLRIQELEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVP---- 381
            |.||||||||||||.||::||||:.||||:...:.....:|||...||   ..|...:.:|    
Zfish   317 MANKQLWLRIQELERQAQIHGLPSNSPSGLTNTDHQNPFIKQESSPEE---NHLQHQSHLPPRYP 378

Human   382 --DPEPLPA------LPPQAPLPLPTQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAP-GH-G 436
              .|:|.|.      |.||.||..|....|  .|.|.:.||...   |.|.|||.:.|.. |. |
Zfish   379 QQHPQPHPQLHQHQHLHPQPPLQYPAVGSS--QHFDLAQSLDLC---DGGIPGYQDGLGDLGFLG 438

Human   437 SPFPSLSKK-DLDLMLLDDSLLPLASDPLLSTMSPEASKASSRRSSFSMEEGDV 489
            .....:.|| :|..:|::::|.||..|||||.||||||..||||||||:|:.|:
Zfish   439 GGIAQMGKKSELSFLLMEEALSPLGGDPLLSAMSPEASVDSSRRSSFSIEDSDI 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFEBNP_001161299.2 MITF_TFEB_C_3_N 18..175 CDD:292573 97/171 (57%)
HLH 247..307 CDD:238036 54/59 (92%)
DUF3371 335..471 CDD:288684 53/150 (35%)
tfebNP_001244121.1 MITF_TFEB_C_3_N 4..168 CDD:292573 97/171 (57%)
HLH 243..303 CDD:238036 54/59 (92%)
DUF3371 332..489 CDD:288684 65/164 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C194337029
Domainoid 1 1.000 175 1.000 Domainoid score I14981
eggNOG 1 0.900 - - E1_KOG1318
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5182
Inparanoid 1 1.050 496 1.000 Inparanoid score I6542
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG50034
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - oto47794
orthoMCL 1 0.900 - - OOG6_117163
Panther 1 1.100 - - LDO PTHR45776
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1708
SonicParanoid 1 1.000 - - X566
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 1 1.500 - -
1919.300

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