DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TFEB and Mitf

DIOPT Version :9

Sequence 1:NP_001161299.2 Gene:TFEB / 7942 HGNCID:11753 Length:490 Species:Homo sapiens
Sequence 2:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster


Alignment Length:664 Identity:180/664 - (27%)
Similarity:251/664 - (37%) Gaps:214/664 - (32%)


- Green bases have known domain annotations that are detailed below.


Human     5 SGWEPAPAATMASRIGLRMQLMREQAQQEEQRERMQQQAV-------MHYM-------------- 48
            ||......||..||..|::||.|||.||    ..:|||.:       ||.:              
  Fly   166 SGGPTFKTATPTSRTQLKLQLQREQQQQ----MMIQQQTLDTAMDPKMHLLFGSGQGLMESEFID 226

Human    49 ---------------QQQQQQQQQQLGGPPTPAINTPVHFQS-PPPVPGEVLKVQSYLENPTSYH 97
                           |..|..|...|....:.| ...|..|| ...||.:||:|.:.|||||.||
  Fly   227 SGSTSACGSGSSSLEQMSQLVQMDNLIDSSSGA-KLKVPLQSIGVDVPPQVLQVSTVLENPTRYH 290

Human    98 LQQSQHQKVREYLSETY---------------------------------------GNKF----- 118
            :.|.|..:||:||||::                                       .|:|     
  Fly   291 VIQKQKNQVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSA 355

Human   119 --AAHISPAQGSPKPPPAASPGVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDNIMRL 181
              |..|.|:..:....|.....||...:.........|||     |....||.........:.:.
  Fly   356 VSAKRIMPSDDAMPISPFGGSFVRCDDINPIEPTVLRPNS-----HGAGEPENAHRTAQLGLSKA 415

Human   182 DDVLGYINPEMQMPNTLPLSSSHLNVYSSDPQVTASLVGV-TSSSCPAD---------------- 229
            :..|........:.|::.:||:..::.|:...::.|:..| ||.|.|.|                
  Fly   416 NSSLSSTRSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSEPDDIFDDILQNDSFNFDKN 480

Human   230 ----LTQKRE---LTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDL----- 282
                |:.|:|   |||||..||||:||||||||:|||||||||||||||||.|:||.:|.     
  Fly   481 FNSELSIKQEPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVV 545

Human   283 -DVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGL---- 342
             |:|.|||||||:|||||:.::.::.:.|:.|...|::|:.|::|..||:||||||:.||:    
  Fly   546 RDIRPNKGTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGILLSE 610

Human   343 --------------------PTTSPSGMNMAELAQQVVKQELPSEEGPG------------EALM 375
                                ||.|.|   ...|..|.|::::...:|..            |...
  Fly   611 NHLTSLSAPTQPYLKSFSLSPTASRS---RRSLFDQPVEKKIQVIDGADGNMGMNQVDEFMEDCK 672

Human   376 LGAEVPDP--------EPLPALPPQAPLPLPTQPPSPFHHLDFS--------------------- 411
            ...:..||        :..|..|....|...:..|..|...|.|                     
  Fly   673 YAVQGGDPMLSSHSHMQSAPQSPSSKTLNSGSFEPKNFSEADESLFRGKSSLASDDCCGINCSTS 737

Human   412 ----HSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLPLASDPLLSTMSPEA 472
                |.|:    ..||.|.:      .|.:....:..........:.|.|....|||||      
  Fly   738 CYIQHQLT----SREGHPNH------SHHTGIREIHSLSDSAQNSEFSRLEHCDDPLLS------ 786

Human   473 SKASSRRSSFSMEE 486
               ||.||..:::|
  Fly   787 ---SSHRSLGTVDE 797

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFEBNP_001161299.2 MITF_TFEB_C_3_N 18..175 CDD:292573 56/239 (23%)
HLH 247..307 CDD:238036 43/65 (66%)
DUF3371 335..471 CDD:288684 36/204 (18%)
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:292573 20/38 (53%)
HLH 505..570 CDD:238036 43/64 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165157591
Domainoid 1 1.000 85 1.000 Domainoid score I8159
eggNOG 1 0.900 - - E1_KOG1318
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 164 1.000 Inparanoid score I4199
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1211990at2759
OrthoFinder 1 1.000 - - FOG0000691
OrthoInspector 1 1.000 - - otm40964
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45776
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1708
SonicParanoid 1 1.000 - - X566
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1211.890

Return to query results.
Submit another query.