DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TFEB and Tfeb

DIOPT Version :10

Sequence 1:NP_001161299.2 Gene:TFEB / 7942 HGNCID:11753 Length:490 Species:Homo sapiens
Sequence 2:XP_063123157.1 Gene:Tfeb / 316214 RGDID:1309583 Length:485 Species:Rattus norvegicus


Alignment Length:483 Identity:452/483 - (93%)
Similarity:461/483 - (95%) Gaps:0/483 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     8 EPAPAATMASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAINTPVH 72
            ||...|.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat     3 EPESTAAMASRIGLRMQLMREQAQQEEQRERMQQQAVMHYMQQQQQQQQQQLGGPPTPAINTPVH 67

Human    73 FQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHISPAQGSPKPPPAASP 137
            |||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||
  Rat    68 FQSPPPVPGEVLKVQSYLENPTSYHLQQSQHQKVREYLSETYGNKFAAHVSPAQGSPKPPPAASP 132

Human   138 GVRAGHVLSSSAGNSAPNSPMAMLHIGSNPERELDDVIDNIMRLDDVLGYINPEMQMPNTLPLSS 202
            |||||||||:||||||||||||||||.||||:|.|||||||||||.|||||||||||||||||||
  Rat   133 GVRAGHVLSTSAGNSAPNSPMAMLHISSNPEKEFDDVIDNIMRLDSVLGYINPEMQMPNTLPLSS 197

Human   203 SHLNVYSSDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNIND 267
            |||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   198 SHLNVYSGDPQVTASLVGVTSSSCPADLTQKRELTDAESRALAKERQKKDNHNLIERRRRFNIND 262

Human   268 RIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQE 332
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   263 RIKELGMLIPKANDLDVRWNKGTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQE 327

Human   333 LEMQARVHGLPTTSPSGMNMAELAQQVVKQELPSEEGPGEALMLGAEVPDPEPLPALPPQAPLPL 397
            |||||||||||||||||:|||||||||||||||||:.|||.||||:|||||||:||||||||||.
  Rat   328 LEMQARVHGLPTTSPSGVNMAELAQQVVKQELPSEDNPGETLMLGSEVPDPEPMPALPPQAPLPS 392

Human   398 PTQPPSPFHHLDFSHSLSFGGREDEGPPGYPEPLAPGHGSPFPSLSKKDLDLMLLDDSLLPLASD 462
            ..||.||||||||||.|||||..||||.|||:||...||||||:|||||||||||||||||||||
  Rat   393 AAQPQSPFHHLDFSHGLSFGGGGDEGPAGYPDPLGTEHGSPFPNLSKKDLDLMLLDDSLLPLASD 457

Human   463 PLLSTMSPEASKASSRRSSFSMEEGDVL 490
            ||.|||||||||||||||||||||||||
  Rat   458 PLFSTMSPEASKASSRRSSFSMEEGDVL 485

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TFEBNP_001161299.2 MITF_TFEB_C_3_N 18..176 CDD:464952 152/157 (97%)
bHLHzip_TFEB 240..330 CDD:381497 89/89 (100%)
DUF3371 335..487 CDD:463372 131/151 (87%)
TfebXP_063123157.1 None

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