Protein Alignment rnf13 and DMA1

DIOPT Version :9

• Sequence 1: NP_957338.1
• Gene: rnf13 / 793981
• ZFINID: ZDB-GENE-040426-772
• Length: 377
• Species: Danio rerio
• Sequence 2: NP_011983.1
• Gene: DMA1 / 856515
• SGDID: S000001157
• Length: 416
• Species: Saccharomyces cerevisiae
• Alignment Length: 313
• Identity: 61/313 - (19%)
• Similarity: 119/313 - (38%)
• Gaps: 75/313 - (23%)

Zfish    18 IFTVQIFAFLNLLPVEADISAYSFDNKTENFDDLPARFGYRLPSEGLKGFLIGARPENACVPIEP 82
            :|::::..|:       |.|:.|..|:...||.:     .|....|.: .:||...|.....|..
Yeast   153 LFSIRLTPFI-------DTSSTSVANQGLFFDPI-----IRTAGAGSQ-IIIGRYTERVREAISK 204

Zfish    83 PPQRENLSSAFIVLIRRFDCNFDIKVLHAQKAGYKAAIVHNVDSDDLISMGSEDLDILKQIDIPS 147
            .|.:.:            ...|..||:......:|.        ||   .|:.   .||.:...|
Yeast   205 IPDQYH------------PVVFKSKVISRTHGCFKV--------DD---QGNW---FLKDVKSSS 243

Zfish   148 -VFIGEE---AANSLKEDYIYEKGGHVILMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQ 208
             .|:..:   :|::..:||:...|..:.|..||....|                 .::...|...
Yeast   244 GTFLNHQRLSSASTTSKDYLLHDGDIIQLGMDFRGGTE-----------------EIYRCVKMKI 291

Zfish   209 DRHRA---RRSRLRKDQLKKLP-IHKFKKGDSYDVCAICLDEYEEGERLRVLPCSHAYHCKCVDP 269
            :.:::   :.:...|:.|.::. :.|...|...:.|:|||::.:..:.:.:.||:|::|..||..
Yeast   292 ELNKSWKLKANAFNKEALSRIKNLQKLTTGLEQEDCSICLNKIKPCQAIFISPCAHSWHFHCVRR 356

Zfish   270 W--LTKTKKTCPVCK-----QKVVPSDGDSE---SDSDSVDSGGE-DNEVSEN 311
            .  :...:..||.|:     :..:.|:.:||   .|.|..|...: |.|::.|
Yeast   357 LVIMNYPQFMCPNCRTNCDLETTLESESESEFENEDEDEPDIEMDIDMEINNN 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf13	NP_957338.1	PA_C_RZF_like	23..180	CDD:239038	32/160 (20%)
		zf-RING_2	238..282	CDD:290367	12/45 (27%)
DMA1	NP_011983.1	FHA	121..308	CDD:224630	36/210 (17%)
		RING-H2_Dmap_like	325..371	CDD:319372	12/45 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.000