Protein Alignment rnf13 and rnf13

DIOPT Version :9

• Sequence 1: NP_957338.1
• Gene: rnf13 / 793981
• ZFINID: ZDB-GENE-040426-772
• Length: 377
• Species: Danio rerio
• Sequence 2: NP_001008015.1
• Gene: rnf13 / 493377
• XenbaseID: XB-GENE-954771
• Length: 383
• Species: Xenopus tropicalis
• Alignment Length: 349
• Identity: 254/349 - (72%)
• Similarity: 299/349 - (85%)
• Gaps: 10/349 - (2%)

Zfish    25 AFLNLLPVEADISAYSFDNKTENFDDLPARFGYRLPSEGLKGFLIGARPENACVPIEPPP-QREN 88
            |.::|:||:||::||:.||.:..||||||||||||||:||||:::.|:|||||.||.||| .|:|
 Frog    25 AVIHLVPVQADVAAYTADNVSRTFDDLPARFGYRLPSDGLKGYIVTAKPENACQPISPPPLLRDN 89

Zfish    89 LSSAFIVLIRRFDCNFDIKVLHAQKAGYKAAIVHNVDSDDLISMGSEDLDILKQIDIPSVFIGEE 153
            .||.|||||:|.:||||:|||:|||||:|||:|:||||||||||||.|:|||||||||||||||.
 Frog    90 TSSVFIVLIKRLECNFDLKVLNAQKAGFKAAVVYNVDSDDLISMGSNDVDILKQIDIPSVFIGES 154

Zfish   154 AANSLKEDYIYEKGGHVILMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRL 218
            :|..|||::.:||||:::|:||.:||||||||||||||||||:|||:|||||||||||||||:||
 Frog   155 SARFLKEEFSWEKGGYIVLVPDLTLPLEYYLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRL 219

Zfish   219 RKDQLKKLPIHKFKKGDSYDVCAICLDEYEEGERLRVLPCSHAYHCKCVDPWLTKTKKTCPVCKQ 283
            |||||||||||||||||.|||||:||||||||::||:||||||||||||||||||||||||||||
 Frog   220 RKDQLKKLPIHKFKKGDEYDVCAVCLDEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQ 284

Zfish   284 KVVPSDGDSESDSDSVDSGGEDNEVSENTPLLRSLASTSAHSFGSMSASLSQHDAGSS------D 342
            |||||.|||||||   ||..|||||||||||||.:||.|..|||::|.|.||.:...|      |
 Frog   285 KVVPSQGDSESDS---DSSQEDNEVSENTPLLRPMASASTQSFGAISESHSQQNMMESSGEDEDD 346

Zfish   343 YDERSDSSDSEEEVTVETVVVQLQ 366
            .|:..||..|:||...|:||||||
 Frog   347 DDDEDDSDSSDEEHNTESVVVQLQ 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
rnf13	NP_957338.1	PA_C_RZF_like	23..180	CDD:239038	105/155 (68%)
		zf-RING_2	238..282	CDD:290367	39/43 (91%)
rnf13	NP_001008015.1	PA_C_RZF_like	24..181	CDD:239038	106/156 (68%)
		RING_Ubox	239..284	CDD:388418	40/44 (91%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	146	1.000	Domainoid score	I18456
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H13493
Inparanoid	1	1.050	524	1.000	Inparanoid score	I6211
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1487241at2759
OrthoFinder	1	1.000	-	-		FOG0001489
OrthoInspector	1	1.000	-	-		oto84228
Panther	1	1.100	-	-	LDO	PTHR22765
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X670
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	9	9.160