DRSC/TRiP Functional Genomics Resources

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Protein Alignment OR4K5 and srsx-36

DIOPT Version :9

Sequence 1:NP_001005483.1 Gene:OR4K5 / 79317 HGNCID:14745 Length:323 Species:Homo sapiens
Sequence 2:NP_506945.2 Gene:srsx-36 / 188941 WormBaseID:WBGene00012055 Length:302 Species:Caenorhabditis elegans


Alignment Length:296 Identity:59/296 - (19%)
Similarity:118/296 - (39%) Gaps:62/296 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    31 FSVLYTVIVLGNLLIILTVTSDTSLHSPMYFLLGNLSFVDICQASFATPKMIADFLSAHETISFS 95
            :|.::.|...|||.::|     .:|||..   |.::..:.||...|....:..|.::.  .:|..
 Worm    12 YSTIFIVGFTGNLFMVL-----VTLHSNK---LRSICNILICVCCFCDLLLFTDVIAF--VVSML 66

Human    96 GCIAQ--IFFIHL------FTGGEMVLLVSMAYDRYVAICKPLYYVVIMSRRTCTVLVMISWAVS 152
            ..:.|  .|:|.:      |.....||.:.:  ||.:|:..|..|.::.:.|...:.:.:::.|.
 Worm    67 TPLTQELCFYISIPADFGAFASNACVLAIGI--DRLIAVAAPTRYKLLENERYKYLFLQMTFPVI 129

Human   153 LVHTLSQLSFTVNLPFCGPNVVDSFFCDLP----RVTKLACLDSYIIEILI-----VVNSGILSL 208
            ...||..:.|....|  ..|||    |.||    ....:..|.|:.|.:.:     .|...:.::
 Worm   130 YSSTLLIMGFGQRDP--RRNVV----CLLPESLGHAYDMFALSSFGINLFVPPIYAYVYFKVKNM 188

Human   209 STFSLLVSSYIIILVTVWLKSSAAMAKAFSTLASHIAVVILFFGPCIFIYVWPFTISPLDKFLAI 273
            |..:.:.:.:..:.||||......|.   :.|...:.|::                 |:|:.:|.
 Worm   189 SDNNSIKTVFKSLSVTVWFVVCGWMT---TDLIGALTVIL-----------------PMDRSVAR 233

Human   274 FYTVF-------TPVLNPIIYTLRNRDMKAAVRKIV 302
            ...::       :...|.::|...:||.::|:|.::
 Worm   234 MVQLYCGTFIFTSSAFNAVVYYKFSRDYRSAMRTML 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OR4K5NP_001005483.1 7tm_4 31..301 CDD:304433 59/293 (20%)
7tm_1 41..287 CDD:278431 52/269 (19%)
srsx-36NP_506945.2 TM helix 1 12..32 CDD:381740 6/24 (25%)
7TM_GPCR_Srsx 16..269 CDD:255903 58/290 (20%)
TM helix 2 41..59 CDD:381740 4/17 (24%)
TM helix 3 75..97 CDD:381740 5/21 (24%)
TM helix 4 118..135 CDD:381740 2/16 (13%)
TM helix 5 161..183 CDD:381740 4/21 (19%)
TM helix 6 194..220 CDD:381740 6/28 (21%)
TM helix 7 233..258 CDD:381740 2/24 (8%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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