DRSC/TRiP Functional Genomics Resources

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Protein Alignment DDX39B and eIF4A

DIOPT Version :10

Sequence 1:NP_004631.1 Gene:DDX39B / 7919 HGNCID:13917 Length:428 Species:Homo sapiens
Sequence 2:NP_476595.1 Gene:eIF4A / 33835 FlyBaseID:FBgn0001942 Length:403 Species:Drosophila melanogaster


Alignment Length:408 Identity:157/408 - (38%)
Similarity:236/408 - (57%) Gaps:14/408 - (3%)


- Green bases have known domain annotations that are detailed below.


Human    15 DDEVETAAGGDGAEAPAKKDVKGSYVSI-HS--SGFRDFLLKPELLRAIVDCGFEHPSEVQHECI 76
            ||..|....|     ||..:.:|...|. |.  ..|.|..|:.||||.|...|||.||.:|...|
  Fly     2 DDRNEIPQDG-----PASMEPEGVIESTWHEVYDNFDDMNLREELLRGIYGYGFEKPSAIQQRAI 61

Human    77 PQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMP 141
            ...:.|.||:.||:||.||||.|.:|.|||::....:...|::..|||||.||.:......:|| 
  Fly    62 IPCVRGRDVIAQAQSGTGKTATFSIAILQQIDTSIRECQALILAPTRELATQIQRVVMALGEYM- 125

Human   142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD 206
            .|......||.::::|..:|:..| |:|||||||:..:...|.|..::||.|:|||.|:||.: .
  Fly   126 KVHSHACIGGTNVREDARILESGC-HVVVGTPGRVYDMINRKVLRTQYIKLFVLDEADEMLSR-G 188

Human   207 MRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLK- 270
            .:..:|::|:|.|.:.||::.|||:..::..|.|.||:||:.|.|..| :|||.|::|:||.:| 
  Fly   189 FKDQIQDVFKMLPPDVQVILLSATMPPDVLEVSRCFMRDPVSILVKKE-ELTLEGIKQFYVNVKQ 252

Human   271 DNEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
            :|.|...|.||.|.|...|.|||..:.::...|.|.:...||...|:|..|.|.:|....:||:.
  Fly   253 ENWKLGTLCDLYDTLSITQSVIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRS 317

Human   336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
            ...|:|:.|:|..||:|:::|::..|||:|.:.:.|:||:.|.||||.||:||.|::|: |.:||
  Fly   318 GSSRVLITTDLLARGIDVQQVSLVINYDLPSNRENYIHRIGRGGRFGRKGVAINFITDD-DRRIL 381

Human   401 NDVQDRFEVNISELPDEI 418
            .|::..:...|.|:|..|
  Fly   382 KDIEQFYHTTIEEMPANI 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDX39BNP_004631.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 4/15 (27%)
DEADc_DDX39 44..251 CDD:350708 82/208 (39%)
Q motif 45..73 13/27 (48%)
DECD box 196..199 2/2 (100%)
SF2_C_DEAD 262..391 CDD:350174 50/129 (39%)
eIF4ANP_476595.1 DEAD-like_helicase_N 6..403 CDD:475120 155/404 (38%)

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