DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMEM43 and tmem43

DIOPT Version :10

Sequence 1:NP_001394203.1 Gene:TMEM43 / 79188 HGNCID:28472 Length:401 Species:Homo sapiens
Sequence 2:NP_001427784.1 Gene:tmem43 / 406520 ZFINID:ZDB-GENE-040426-2348 Length:391 Species:Danio rerio


Alignment Length:381 Identity:202/381 - (53%)
Similarity:272/381 - (71%) Gaps:7/381 - (1%)


- Green bases have known domain annotations that are detailed below.


Human    23 PGFLERLSETSGGMFVGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPE--NE 85
            |||||||..::||:..|...|.||.|::||||||||:.|.:|.||||.:|...|  ...||  |:
Zfish    12 PGFLERLRASTGGVIAGACLFALSLYVLFTNEGRALRIAAALDEGLSQLVCVQS--DAQPELRND 74

Human    86 GRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESREYTEDGQVKKETRYSYTDT 150
            |||||:.|.|||::.|.||||.|.:.||||:|.||||||||..:||...|:|:.|.||.||| :|
Zfish    75 GRLVHLSGDLRTAQPLHDPNYSVSVHAVKLQRQVEMYQWVEYSDSRTVEENGEKKTETTYSY-NT 138

Human   151 EWRSEIINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNFKSLSLSKLEDP 215
            |||||:|:|::||:|:||.|||.|||||....||.|.:|.|.||:||::::..|.:||||.|..|
Zfish   139 EWRSEVISSRHFDQEVGHMNPSEMAVESVTVVAPEVWVGNFLLSTGLVEQISEFHTLSLSALPVP 203

Human   216 HVDIIR-RGDFFYHSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLVPFSTK 279
            ....:. :.|::||:.||::|||||:||.|:|||||||....|.||.|:|:|:|...||.|||::
Zfish   204 VAGFLTVQDDYYYHTPNPRHPEVGDVRVRFAYAGLSGDGLYPGSAHKVSVVAQQHQQQLRPFSSR 268

Human   280 SGDTLLLLHHGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLVDWFPVFRDL 344
            ||.||.||:.|..:|||:|.:|.:.||||||.||.||...||:.::|.||:::|||:..|:...|
Zfish   269 SGHTLELLYMGQLTAEELFAKEHQLNSMKTWALRLAGCTLMFLSISLSTRVIHTLVERVPLLGGL 333

Human   345 VNIGLKAFAFCVATSLTLLTVAAGWLFYRPLWALLIAGLALV-PILVARTRVPAKK 399
            :::||:.|..|.:.||:|||:||||::||||.||.:|..||| |:.:|..|.||||
Zfish   334 LSVGLQLFCLCSSISLSLLTIAAGWIYYRPLLALCVAAAALVLPLALAHARAPAKK 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM43NP_001394203.1 TMEM43 121..374 CDD:462267 131/253 (52%)
tmem43NP_001427784.1 None

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