DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMEM43 and Tmem43

DIOPT Version :10

Sequence 1:NP_001394203.1 Gene:TMEM43 / 79188 HGNCID:28472 Length:401 Species:Homo sapiens
Sequence 2:NP_648162.2 Gene:Tmem43 / 38881 FlyBaseID:FBgn0035825 Length:376 Species:Drosophila melanogaster


Alignment Length:382 Identity:127/382 - (33%)
Similarity:195/382 - (51%) Gaps:55/382 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    29 LSETSGG----MFVGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSVAPEN----E 85
            ||||...    ...|::.|:.....::.|||||:....:|.|..:.:.   |:.....|.    |
  Fly     4 LSETLRSHWPIALFGVILFVAGGTELYWNEGRAVHNMMALDEAHADIY---SVRFTEEEQEVGLE 65

Human    86 GRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEESREYTED-GQVKKETRYSYTD 149
            ||:||:.|.:...:.|::|:|.:.|.||||||.|:||||||......|.:. |....::|..|..
  Fly    66 GRIVHLSGPILVGEPLTEPDYNIQLLAVKLRRRVQMYQWVEEAVEHNYGDSVGTTHSDSRTYYYT 130

Human   150 TEWRSEIINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSSGLIDKVDNFKSLSLS-KLE 213
            .|||.:|::|:||....||.|||...:||.:..|..|.|||:.|.:.:.:|.:|::.|:.. :.|
  Fly   131 REWRDKIVDSRNFYNRHGHTNPSHFPIESHVQVADAVFIGRYELGAEVKEKFNNYQELTSDIRPE 195

Human   214 DP----HVDIIRRGDFFYHSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAHVVTVIARQRGDQLV 274
            |.    |:.|      :||:.:...|||||||:.||:||:.|:        |.:|:.:..|::||
  Fly   196 DSGVKLHLGI------YYHTNDVFNPEVGDLRLLFSFAGMEGE--------VFSVVGKLSGNKLV 246

Human   275 PFSTKSGDTLLLLHHGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLNLMTRILYTLV---- 335
            |:.|..|..:||::.|..|.:|||..|.|:..:.||..|..||:.:|.|:...|:||..|.    
  Fly   247 PYITSRGVPVLLVYPGGLSVQEVFRLEARAQVLHTWWWRFVGWLLIFFGVTCNTKILRLLFVRVP 311

Human   336 --------DWFPVFRDLVNIGLKAFAFCVATSLTLLTVAAGWLFYRPL--WALLIAG 382
                    ..|||..:|:          :|.||.|...|..|:.:||:  ..||:||
  Fly   312 LLVALAPDPQFPVTGNLL----------IAFSLALTIAAVAWILHRPVIGACLLLAG 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM43NP_001394203.1 TMEM43 121..374 CDD:462267 89/270 (33%)
Tmem43NP_648162.2 TMEM43 101..348 CDD:462267 89/270 (33%)

Return to query results.
Submit another query.