DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMEM43 and Tmem43

DIOPT Version :10

Sequence 1:NP_001394203.1 Gene:TMEM43 / 79188 HGNCID:28472 Length:401 Species:Homo sapiens
Sequence 2:NP_001007746.1 Gene:Tmem43 / 362401 RGDID:1549711 Length:400 Species:Rattus norvegicus


Alignment Length:401 Identity:365/401 - (91%)
Similarity:383/401 - (95%) Gaps:1/401 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAANYSSTSTRREHVKVKTSSQPGFLERLSETSGGMFVGLMAFLLSFYLIFTNEGRALKTATSLA 65
            ||||||||.:|:|||||.:..|||||||||||||||||||:.|||||||||||||||||||..||
  Rat     1 MAANYSSTGSRKEHVKVTSDPQPGFLERLSETSGGMFVGLVTFLLSFYLIFTNEGRALKTANLLA 65

Human    66 EGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEES 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 EGLSLVVSPDSIHSVAPENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWVETEES 130

Human   131 REYTEDGQVKKETRYSYTDTEWRSEIINSKNFDREIGHKNPSAMAVESFMATAPFVQIGRFFLSS 195
            .||||||||||||:||| :|||||||::|||||||||||||||||||||.||||||||||||||:
  Rat   131 NEYTEDGQVKKETKYSY-NTEWRSEIVSSKNFDREIGHKNPSAMAVESFTATAPFVQIGRFFLSA 194

Human   196 GLIDKVDNFKSLSLSKLEDPHVDIIRRGDFFYHSENPKYPEVGDLRVSFSYAGLSGDDPDLGPAH 260
            |||||:||||.|||:|||||||||||||||||||||||||||||:||||||||||.|||||||||
  Rat   195 GLIDKIDNFKPLSLAKLEDPHVDIIRRGDFFYHSENPKYPEVGDVRVSFSYAGLSSDDPDLGPAH 259

Human   261 VVTVIARQRGDQLVPFSTKSGDTLLLLHHGDFSAEEVFHRELRSNSMKTWGLRAAGWMAMFMGLN 325
            |||||||||||||:|:||||||||||||||||||||||.||.:||||||||||||||||||||||
  Rat   260 VVTVIARQRGDQLIPYSTKSGDTLLLLHHGDFSAEEVFRREQKSNSMKTWGLRAAGWMAMFMGLN 324

Human   326 LMTRILYTLVDWFPVFRDLVNIGLKAFAFCVATSLTLLTVAAGWLFYRPLWALLIAGLALVPILV 390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||.|:..||||||::
  Rat   325 LMTRILYTLVDWFPVFRDLVNIGLKAFAFCVATSLTLLTVAAGWLFYRPLWAALLGCLALVPIII 389

Human   391 ARTRVPAKKLE 401
            ||||||.||||
  Rat   390 ARTRVPTKKLE 400

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM43NP_001394203.1 TMEM43 121..374 CDD:462267 234/252 (93%)
Tmem43NP_001007746.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23 14/21 (67%)
TMEM43 121..373 CDD:462267 234/252 (93%)

Return to query results.
Submit another query.