Sequence 1: | NP_001276990.1 | Gene: | SEMA3B / 7869 | HGNCID: | 10724 | Length: | 754 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001163178.1 | Gene: | Sema1b / 37007 | FlyBaseID: | FBgn0016059 | Length: | 770 | Species: | Drosophila melanogaster |
Alignment Length: | 561 | Identity: | 171/561 - (30%) |
---|---|---|---|
Similarity: | 271/561 - (48%) | Gaps: | 56/561 - (9%) |
- Green bases have known domain annotations that are detailed below.
Human 3 RAGAAAV----IPGLALLWAVGLGSAAPSPPRLRLSFQELQAWHGLQTFSLERTCCYQALLVDEE 63
Human 64 RGRLFVGAENHVASLNLDNISKRAKKLAWPAPVEWREECNWAGKDIGTECMNFVKLLHAYNRTHL 128
Human 129 LACGTGAFHPTC--------AFVEVGHRAEEPVLRLDPGRIEDGKGKSPYDPRHRAASVLVGEEL 185
Human 186 YSGVAADLMGRDFTIFRSLGQRPSLRTEPHDSRWLNEPKFVKVFWIPESENPDDDKIYFFFRETA 250
Human 251 VEAAPALGRLSVSRVGQICRNDVGGQRSLVNKWTTFLKARLVCSVPGVEGDTHFDQLRPFPAEDV 315
Human 316 FLLSSRDHRTPLLYAVFSTSSSIFQGSAVCVYSMNDVRRAFLGPFAHKEGPMHQWVSYQ-GRVPY 379
Human 380 PRPGMC--PSKTFGTFSSTKDFPDDVIQFARNHPLMYNSVLPTGGRPLFLQVGANYTFTQIAA-D 441
Human 442 RVAAADG-HYDVLFIGTDVGTVLKVISV----PKGSRPSAEGLLLEELHVFEDSAAVTSMQISSK 501
Human 502 RHQLYVASRSAVAQIALHRCAAHGRVCTECCLARDPYCAWD 542 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SEMA3B | NP_001276990.1 | Sema | 46..521 | CDD:301699 | 148/491 (30%) |
PSI | 520..>556 | CDD:214655 | 10/23 (43%) | ||
Ig_Semaphorin_classIII | 580..670 | CDD:143279 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 707..754 | ||||
Sema1b | NP_001163178.1 | Sema_1A | 55..511 | CDD:200498 | 147/488 (30%) |
PSI | 510..>537 | CDD:214655 | 10/23 (43%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3611 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR11036 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.910 |