DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment FZD5 and fzd5

DIOPT Version :9

Sequence 1:NP_003459.2 Gene:FZD5 / 7855 HGNCID:4043 Length:585 Species:Homo sapiens
Sequence 2:XP_004917802.1 Gene:fzd5 / 100488110 XenbaseID:XB-GENE-479707 Length:559 Species:Xenopus tropicalis


Alignment Length:574 Identity:427/574 - (74%)
Similarity:479/574 - (83%) Gaps:26/574 - (4%)


- Green bases have known domain annotations that are detailed below.


Human    12 LLLLLLAQLVGRAAAASKAPVCQEITVPMCRGIGYNLTHMPNQFNHDTQDEAGLEVHQFWPLVEI 76
            |.::||.........||||.||||||||||:|||||.|:||||||||||||||:|||||||||.|
 Frog    12 LFVILLLDYFAPVRPASKAIVCQEITVPMCKGIGYNHTYMPNQFNHDTQDEAGMEVHQFWPLVVI 76

Human    77 QCSPDLRFFLCSMYTPICLPDYHKPLPPCRSVCERAKAGCSPLMRQYGFAWPERMSCDRLPVLGR 141
            |||.||:|||||||||||||||.||||||||||||||||||||||:|||||||||:|||||..| 
 Frog    77 QCSLDLKFFLCSMYTPICLPDYRKPLPPCRSVCERAKAGCSPLMRKYGFAWPERMNCDRLPEHG- 140

Human   142 DAEVLCMDYNRSEATTAPPRPFPAKPTLPGPPGAPASGGECPAGGPFVCKCREPFVPILKESHPL 206
            |.:.||||||.:|.||.||      ||.|.....|:|  :|..    ||||||||:.|.:|||||
 Frog   141 DPDTLCMDYNWTETTTTPP------PTHPPKVKTPSS--DCDG----VCKCREPFLSITRESHPL 193

Human   207 YNKVRTGQVPNCAVPCYQPSFSADERTFATFWIGLWSVLCFISTSTTVATFLIDMERFRYPERPI 271
            ||:::||||||||:||:||.|:.||:|||||||||||:||||||.||||||||||||||||||||
 Frog   194 YNRIKTGQVPNCAMPCFQPYFTQDEKTFATFWIGLWSILCFISTFTTVATFLIDMERFRYPERPI 258

Human   272 IFLSACYLCVSLGFLVRLVVGHASVACSREHNHIHYETTGPALCTIVFLLVYFFGMASSIWWVIL 336
            ||||||||.||:|::|||:|||.:|||:::  |||||||||||||:||||:||||||||||||||
 Frog   259 IFLSACYLFVSIGYIVRLIVGHENVACNKD--HIHYETTGPALCTVVFLLIYFFGMASSIWWVIL 321

Human   337 SLTWFLAAGMKWGNEAIAGYAQYFHLAAWLIPSVKSITALALSSVDGDPVAGICYVGNQNLNSLR 401
            :.||||||||||||||||.|:||||:|||||||||||..|||||||||||||||:||||||::||
 Frog   322 TFTWFLAAGMKWGNEAIASYSQYFHMAAWLIPSVKSIAVLALSSVDGDPVAGICFVGNQNLDNLR 386

Human   402 GFVLGPLVLYLLVGTLFLLAGFVSLFRIRSVIKQGGTKTDKLEKLMIRIGIFTLLYTVPASIVVA 466
            ||||.|||:||..||:||||||||||||||||||||||||||||||||||||::||||||:||||
 Frog   387 GFVLAPLVVYLFTGTMFLLAGFVSLFRIRSVIKQGGTKTDKLEKLMIRIGIFSVLYTVPATIVVA 451

Human   467 CYLYEQHYRESWEAALTCACPGHDTGQPRAKPEYWVLMLKYFMCLVVGITSGVWIWSGKTVESWR 531
            ||:|||||||.||.|..|:|||   .:.|.:|:|.|.|||||||||||||||||||||||:|||:
 Frog   452 CYIYEQHYREHWEKAHNCSCPG---DKKRYRPDYAVFMLKYFMCLVVGITSGVWIWSGKTLESWK 513

Human   532 RFTSRCCCRPRRGHKSGGAMAAGDYPEASAALTGRTGPPGPAATYHKQVSLSHV 585
            |||.|||    |..|...|.|   |.|||.|||.||| ...:..:||||.||||
 Frog   514 RFTGRCC----RNSKPINASA---YSEASRALTARTG-LSSSTLHHKQVPLSHV 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
FZD5NP_003459.2 TM helix 5 397..426 CDD:320377 21/28 (75%)
TM helix 6 446..473 CDD:320377 22/26 (85%)
TM helix 7 496..521 CDD:320377 19/24 (79%)
Lys-Thr-X-X-X-Trp motif, mediates interaction with the PDZ domain of Dvl family members. /evidence=ECO:0000250 525..530 3/4 (75%)
PDZ-binding 583..585 1/1 (100%)
CRD_FZ5 29..156 CDD:143569 107/126 (85%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 156..179 8/22 (36%)
7tmF_FZD5 225..535 CDD:320377 252/309 (82%)
TM helix 1 234..259 CDD:320377 22/24 (92%)
TM helix 2 268..289 CDD:320377 16/20 (80%)
TM helix 3 316..342 CDD:320377 21/25 (84%)
TM helix 4 359..375 CDD:320377 14/15 (93%)
fzd5XP_004917802.1 CRD_FZ5 29..153 CDD:143569 106/124 (85%)
7tmF_FZD5 212..517 CDD:320377 252/309 (82%)
TM helix 1 221..246 CDD:320377 22/24 (92%)
TM helix 2 255..276 CDD:320377 16/20 (80%)
TM helix 3 301..327 CDD:320377 21/25 (84%)
TM helix 4 344..360 CDD:320377 14/15 (93%)
TM helix 5 382..411 CDD:320377 21/28 (75%)
TM helix 6 431..458 CDD:320377 22/26 (85%)
TM helix 7 478..503 CDD:320377 19/24 (79%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 536 1.000 Domainoid score I3166
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2590
Inparanoid 1 1.050 875 1.000 Inparanoid score I3852
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG49270
OrthoDB 1 1.010 - - D105541at32523
OrthoFinder 1 1.000 - - FOG0003114
OrthoInspector 1 1.000 - - oto158024
Panther 1 1.100 - - LDO PTHR11309
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4396
SonicParanoid 1 1.000 - - X126
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1414.110

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