DRSC/TRiP Functional Genomics Resources

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Protein Alignment CXCR4 and TkR99D

DIOPT Version :9

Sequence 1:NP_001334985.1 Gene:CXCR4 / 7852 HGNCID:2561 Length:423 Species:Homo sapiens
Sequence 2:NP_001263092.1 Gene:TkR99D / 43551 FlyBaseID:FBgn0004622 Length:564 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CXCR4NP_001334985.1 CXCR4_N 77..109 CDD:314911
7tmA_CXCR4 110..384 CDD:320307
TM helix 1 110..137 CDD:320307
TM helix 2 144..169 CDD:320307
TM helix 3 180..210 CDD:320307
TM helix 4 222..244 CDD:320307
TM helix 5 267..296 CDD:320307
TM helix 6 303..333 CDD:320307
TM helix 7 352..377 CDD:320307
TkR99DNP_001263092.1 7tm_4 113..396 CDD:304433
7tm_1 118..381 CDD:278431
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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