DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CXCR4 and CCHa2-R

DIOPT Version :9

Sequence 1:NP_001334985.1 Gene:CXCR4 / 7852 HGNCID:2561 Length:423 Species:Homo sapiens
Sequence 2:NP_001356958.1 Gene:CCHa2-R / 35535 FlyBaseID:FBgn0033058 Length:501 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CXCR4NP_001334985.1 CXCR4_N 77..109 CDD:314911
7tmA_CXCR4 110..384 CDD:320307
TM helix 1 110..137 CDD:320307
TM helix 2 144..169 CDD:320307
TM helix 3 180..210 CDD:320307
TM helix 4 222..244 CDD:320307
TM helix 5 267..296 CDD:320307
TM helix 6 303..333 CDD:320307
TM helix 7 352..377 CDD:320307
CCHa2-RNP_001356958.1 7tmA_Bombesin_R-like 70..362 CDD:320593
TM helix 1 71..97 CDD:320593
TM helix 2 104..130 CDD:320593
TM helix 3 142..172 CDD:320593
TM helix 4 182..202 CDD:320593
TM helix 5 234..259 CDD:320593
TM helix 6 285..315 CDD:320593
TM helix 7 330..355 CDD:320593
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.