DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX8 and Poxm

DIOPT Version :10

Sequence 1:NP_003457.1 Gene:PAX8 / 7849 HGNCID:8622 Length:450 Species:Homo sapiens
Sequence 2:NP_001036687.1 Gene:Poxm / 40990 FlyBaseID:FBgn0003129 Length:370 Species:Drosophila melanogaster


Alignment Length:446 Identity:149/446 - (33%)
Similarity:184/446 - (41%) Gaps:152/446 - (34%)


- Green bases have known domain annotations that are detailed below.


Human    10 HGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYYETGSIRPG 74
            :|.:|||||.||||||||...|.|||:||..|:||||||||||||||||||||.||:|||||.||
  Fly    10 YGEVNQLGGVFVNGRPLPNATRMRIVELARLGIRPCDISRQLRVSHGCVSKILARYHETGSILPG 74

Human    75 VIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINRIIRTKVQQP 139
            .||||||:|.|||||..|.:.|:::|.:||||||||||:||:||...|||||||:||:|.|:.  
  Fly    75 AIGGSKPRVTTPKVVNYIRELKQRDPGIFAWEIRDRLLSEGICDKTNVPSVSSISRILRNKLG-- 137

Human   140 FNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSING-------------LLGIAQP 191
                          |.||...|.:.:    ...|.|.|.:.|.||             |..:..|
  Fly   138 --------------SLGHQHTPGTVM----GSGSSSGGGSVSSNGGQNNGTSASNNINLSNLGNP 184

Human   192 GSDKRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAYASPS--- 253
            |                        .||           ||      |....|:..|.|:.|   
  Fly   185 G------------------------GGP-----------HH------PHHHHHHQSAAAAASAHH 208

Human   254 ---HTKGEQGLYPLPLLNSTLDDGKATL-----TPSNTPL------GRNLSTHQTYPVVADPHSP 304
               |......||     ||......|..     ||..:|.      |:....|        ||. 
  Fly   209 VHAHAHAHAHLY-----NSIYQPYSAAAAYSMKTPCGSPSPPQGAGGQGSVPH--------PHQ- 259

Human   305 FAIKQETPEVSSSSSTPSSLSSSAFLDLQ---------QVGSGVPPFNAFPHAASVYGQFTGQAL 360
               .:.....::::..|||.|.|..|...         |||.||                     
  Fly   260 ---LRSVAAAAAAAHWPSSHSVSDILAHHQAVALRASCQVGVGV--------------------- 300

Human   361 LSGREMVGPTLPGYPPHIPTSGQGSYASSAIAGMVAGS---EYSGNAYGHTPYSSY 413
             .|...:|.|:...|          ...|.:||...|.   :..|.|...:||:.|
  Fly   301 -GGMGGMGSTVSPLP----------MTPSPVAGTAGGQPLLDCEGGAGQQSPYNYY 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX8NP_003457.1 PAX 9..133 CDD:128645 88/122 (72%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68 42/55 (76%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 30/47 (64%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..222 12/75 (16%)
Pax2_C 337..449 CDD:463563 15/80 (19%)
PoxmNP_001036687.1 PAX 10..133 CDD:128645 88/122 (72%)

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