DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX8 and toe

DIOPT Version :10

Sequence 1:NP_003457.1 Gene:PAX8 / 7849 HGNCID:8622 Length:450 Species:Homo sapiens
Sequence 2:NP_524041.2 Gene:toe / 39418 FlyBaseID:FBgn0036285 Length:640 Species:Drosophila melanogaster


Alignment Length:542 Identity:147/542 - (27%)
Similarity:207/542 - (38%) Gaps:176/542 - (32%)


- Green bases have known domain annotations that are detailed below.


Human    16 LGGAFVNGRP-------------LPEVVRQ-RIVDLAHQGVRPCDISRQLRVSHGCVSKILGRYY 66
            |||.|..|..             |..:..| |:::|:..|:|..|:::.:....|.|||:|    
  Fly   104 LGGIFCGGSAAAGPGAAAAAATNLNALASQHRLLELSRFGLRGYDLAQHMLSQQGAVSKLL---- 164

Human    67 ETGSIR-PGVIGGSKPKVATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSINR 130
              |::| ||:|||||||||||.||.||..|||:|||:||||||:||:.||||.|.|.||||||||
  Fly   165 --GTLRPPGLIGGSKPKVATPTVVSKIEQYKRENPTIFAWEIRERLITEGVCTNATAPSVSSINR 227

Human   131 IIRTKVQQPFNLPMDSCVATKSLSPGHTLIPS------------------SAV---TPP------ 168
            |:|.:..:     ..:....::.|.|:.:.|:                  .||   |||      
  Fly   228 ILRNRAAE-----RAAAEFARAASYGYAIHPTHPHPYTSFPTWPAHHPLWGAVPLATPPGGGPAG 287

Human   169 --ESPQSDSLGSTYSINGLLGIAQPGSDKRK--------------MDDSDQDSCRLSIDSQSSSS 217
              .:.|....||:|..:|.:. :.|.|....              ..||...|.|||:.:.|..|
  Fly   288 AGGALQPGGSGSSYGSDGNMS-SNPNSSNSNTTHSNGHNTNSGSGCGDSSAGSGRLSLPALSPDS 351

Human   218 GPRKHLRTDA-----------------------------FSQHHLEPLECPFERQHYP------- 246
            |.|.....||                             ||...|:.||..|::.|||       
  Fly   352 GSRDSRSPDADANRMIDIEGEDSESQDSDQPKFRRNRTTFSPEQLDELEKEFDKSHYPCVNTREK 416

Human   247 --------EAYA------------------------SPSHTKGEQGLYPLPLLNSTLDDGKATLT 279
                    ||..                        |||.:..     |.||:|..:........
  Fly   417 LAARTALSEARVQVWFSNRRAKWRRHQRVNLIKQRDSPSTSSS-----PTPLVNPVVSPVSPIPV 476

Human   280 PSNTPLGRNLSTHQTYPV----VADPHSPFAIKQETPEV---SSSSSTPSSLSSSAFLDLQQVGS 337
            |....:..:....|.||.    :.:..|..:..|....:   |..||..||:||:..::      
  Fly   477 PVPVAVPESGQQKQPYPYSTSNMCNTSSSSSNSQPCNTINPGSKMSSKTSSVSSNQHME------ 535

Human   338 GVPPFNAFPHAASVYGQFTGQALLS-GRE-----MVGPTLPGYPPHIPTSGQGSYASSAIAGMVA 396
                   .|.||......|..|.|| |.|     .:..||| .|..:||:...::|.|.....:|
  Fly   536 -------EPAAAVATASPTASAPLSMGGENSAFRALPMTLP-MPMTLPTASAAAFALSFARQYIA 592

Human   397 GSEYSGN----AYGHTPYSSYS 414
              :|.|.    .:|.:|..:.|
  Fly   593 --KYMGTPLNLGHGSSPIQAQS 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX8NP_003457.1 PAX 9..133 CDD:128645 65/131 (50%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68 17/65 (26%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 34/47 (72%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..222 23/105 (22%)
Pax2_C 337..449 CDD:463563 23/88 (26%)
toeNP_524041.2 HTH_ARSR 134..230 CDD:481197 58/101 (57%)
Homeodomain 385..441 CDD:459649 11/55 (20%)

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