DRSC/TRiP Functional Genomics Resources

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Protein Alignment PAX8 and Poxn

DIOPT Version :10

Sequence 1:NP_003457.1 Gene:PAX8 / 7849 HGNCID:8622 Length:450 Species:Homo sapiens
Sequence 2:NP_476686.1 Gene:Poxn / 36741 FlyBaseID:FBgn0003130 Length:425 Species:Drosophila melanogaster


Alignment Length:483 Identity:164/483 - (33%)
Similarity:212/483 - (43%) Gaps:126/483 - (26%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPHNSIRSGHGGLNQLGGAFVNGRPLPEVVRQRIVDLAHQGVRPCDISRQLRVSHGCVSKILGRY 65
            |||    :|..|:|||||.||||||||:.||:||||||..|||||||||||.||||||||||.|:
  Fly     1 MPH----TGQAGVNQLGGVFVNGRPLPDCVRRRIVDLALCGVRPCDISRQLLVSHGCVSKILTRF 61

Human    66 YETGSIRPGVIGGSKPK-VATPKVVEKIGDYKRQNPTMFAWEIRDRLLAEGVCDNDTVPSVSSIN 129
            |||||||||.|||||.| ||||.||:||...|.:|..|||||||::|..:.|||..:|||:||||
  Fly    62 YETGSIRPGSIGGSKTKQVATPTVVKKIIRLKEENSGMFAWEIREQLQQQRVCDPSSVPSISSIN 126

Human   130 RIIRTKVQQPFNLPMDSCVATKSLSPGHTLIPSSAVTPPESPQSDSLGSTYSINGLLGIAQPGSD 194
            ||:|..     .|..|...:::.        .::|.....:..:...||..| ||..|.|.|   
  Fly   127 RILRNS-----GLWTDEMTSSQQ--------NAAAAAAAAAAAAHQAGSGPS-NGYGGQAPP--- 174

Human   195 KRKMDDSDQDSCRLSIDSQSSSSGPRKHLRTDAFSQHHLEPLECPFERQHYPEAYASP----SHT 255
                              ...:..|.....|.:.::                  ||.|    .::
  Fly   175 ------------------PPVTVAPPTPAATPSIAR------------------YAKPPALMMNS 203

Human   256 KGEQGLYPLPLLNSTLDDGKA-TLTPSNTPLGRNLST---HQTYPVVADPHSPFAIKQETPEVSS 316
            .||..:.|.|.:..::..|.: .|.|:.:.|..:.|.   |..:                     
  Fly   204 AGEMPIKPAPKMPPSMGHGHSHGLNPNVSGLDLSYSALHKHWLW--------------------- 247

Human   317 SSSTPSSL-SSSAFLDLQQVGSG---VPPFNAF-PHA--------ASVYGQFTGQALLSGREMVG 368
               .||.| .:.|.:..|...||   :|....: |||        .|..|.||...  |..::..
  Fly   248 ---NPSLLYYTQAHIQAQAAASGGQFLPYAGGYLPHAMAAAAASSTSALGGFTKSE--SSIDLST 307

Human   369 PTLPGYPPHIPTSGQGSYASSAI----AGMVAGS--EYS-GNAYGHT----PYSSYSEAWRFPNS 422
            |...|.......||:.|.|:.::    .|..|||  |.| |:...|:    || |..|..:.|..
  Fly   308 PGAAGDALSDCDSGKSSPAALSLTASGGGNGAGSAPEASPGSTLSHSRKRNPY-SIEELLKKPEK 371

Human   423 SL---------LSSPYYYSSTSRPSAPP 441
            .|         |.|....||...|.|||
  Fly   372 RLRLDSNRLECLESSSCESSQDSPVAPP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PAX8NP_003457.1 PAX 9..133 CDD:128645 90/124 (73%)
PAI subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 12..68 45/55 (82%)
RED subdomain. /evidence=ECO:0000255|PROSITE-ProRule:PRU00381 87..135 27/47 (57%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..222 10/62 (16%)
Pax2_C 337..449 CDD:463563 39/137 (28%)
PoxnNP_476686.1 HTH_ARSR 5..133 CDD:481197 91/132 (69%)

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