DRSC/TRiP Functional Genomics Resources

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Protein Alignment LAPTM5 and CG11286

DIOPT Version :9

Sequence 1:NP_006753.1 Gene:LAPTM5 / 7805 HGNCID:29612 Length:262 Species:Homo sapiens
Sequence 2:NP_649735.1 Gene:CG11286 / 40919 FlyBaseID:FBgn0037516 Length:191 Species:Drosophila melanogaster


Alignment Length:92 Identity:19/92 - (20%)
Similarity:32/92 - (34%) Gaps:31/92 - (33%)


- Green bases have known domain annotations that are detailed below.


Human   161 YLNFKSMNHMNYLPSQEDMPHNQ-------FIKMMIIFSIAFITVLIFKVYMFKCVWRCYRLIKC 218
            ||:.|:.....:|...|.:..||       |:|               |:..:|.:|......:.
  Fly   111 YLDSKAKYDRQFLHEMEHIIANQRNICDQFFLK---------------KILCYKTMWPPLHTKRE 160

Human   219 MNSV---------EEKRNSKMLQKVVL 236
            :|:.         :|||..:.|.|..|
  Fly   161 LNNFVSKFFQLPPKEKRRVEYLLKTDL 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LAPTM5NP_006753.1 Mtp 28..261 CDD:281772 19/92 (21%)
CG11286NP_649735.1 DUF4790 92..184 CDD:292656 17/87 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4964
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.950

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