DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment DDR1 and Eph

DIOPT Version :10

Sequence 1:XP_054186331.1 Gene:DDR1 / 780 HGNCID:2730 Length:984 Species:Homo sapiens
Sequence 2:NP_524625.3 Gene:Eph / 43803 FlyBaseID:FBgn0025936 Length:1096 Species:Drosophila melanogaster


Alignment Length:549 Identity:153/549 - (27%)
Similarity:234/549 - (42%) Gaps:152/549 - (27%)


- Green bases have known domain annotations that are detailed below.


Human   437 LIGCLVAIILLLLLIIALMLWRLHWRRLLSKAERRVLEEELTVHLSVPGDTILINNRPGPREPPP 501
            :.|.:|..:|.|::.|...::      .:....:..|:::.|.||.:|.|.              
  Fly   640 IAGAIVTGVLFLVIFIIATVY------FMRSKHQDDLDKKSTNHLPLPLDY-------------- 684

Human   502 YQEPRPRGNPPHSAPCVPNGSALLLSNPAYRLLLATYARPPRGPGPPTPAWAKPTNTQAYSGDYM 566
                  ..|..:|....|....|.|:                   ..||.:..       |..|:
  Fly   685 ------ASNEVNSMDTTPIVKKLHLN-------------------VTTPLFGN-------SRSYV 717

Human   567 EPEKPGAPLLPPPPQNSVPHYA---EADIVTLQGVTGGNTYAVPALPPGAVGDGPPRVDFPRSRL 628
            :|.      ....|..::..:|   :|:.:|::.:.||                           
  Fly   718 DPH------TYEDPNQAIREFAREIDANYITIEAIIGG--------------------------- 749

Human   629 RFKEKLGEGQFGEVHLCEVDSPQDLV-SLDFPLNVRKGHPLLVAVKILRPDATKNASFSLFSRND 692
                    |:||:|....:..|.:.| .:|            ||:|.|:|.:::.|      |.|
  Fly   750 --------GEFGDVCRGRLKIPPNFVQDID------------VAIKTLKPGSSEKA------RCD 788

Human   693 FLKEVKIMSRLKDPNIIRLLGVCVQDDPLCMITDYMENGDLNQFLSAHQLEDKAAEGAPGDGQAA 757
            ||.|..||.:...||:|.|.||..:.:|:.:||:|||||.|:.||..:.          |..|..
  Fly   789 FLTEASIMGQFDHPNVIYLQGVVTRSNPVMIITEYMENGSLDTFLRVND----------GKFQTL 843

Human   758 QGPTISYPMLLHVAAQIASGMRYLATLNFVHRDLATRNCLVGENFTIKIADFGMSRNL-YAGDYY 821
            |        |:.:...|||||.||:.:|:||||||.||.||......||||||:||.: .|.|.|
  Fly   844 Q--------LIVMLRGIASGMSYLSDMNYVHRDLAARNVLVNAQLICKIADFGLSREIENASDAY 900

Human   822 RVQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEVLMLCRAQPFGQLTDEQVIENAGEFFR 886
            ..:| ..:|:||.|.|.|...|||:|||||::||.|||| |....:|:...:::.||::..:.:|
  Fly   901 TTRG-GKIPVRWTAPEAIAFRKFTSASDVWSYGVVLWEV-MSYGERPYWNWSNQDVIKSIEKGYR 963

Human   887 DQGRQVYLSRPPACPQGLYELMLRCWSRESEQRPPFSQLHRFLAEDALNTKPLSPTQLVLWMGSS 951
                   |..|..||:.||:|||.||.::...||.|:.:...|  |.|..:|    |.:|....|
  Fly   964 -------LPAPMDCPEALYQLMLDCWQKQRTHRPTFASIVSTL--DNLARQP----QSLLTTRPS 1015

Human   952 PPSSSHPL--GKGGEKYRIDTGHGPLEHL 978
            |.|..:.:  |:.|:...|.|... |||:
  Fly  1016 PESDGNHILDGQRGQNIFISTDLW-LEHI 1043

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DDR1XP_054186331.1 FA58C 78..202 CDD:238014
PTKc_DDR1 622..931 CDD:133227 111/310 (36%)
EphNP_524625.3 EphR_LBD 85..260 CDD:198439
FN3 387..476 CDD:238020
FN3 536..623 CDD:238020
EphA2_TM 640..738 CDD:464211 23/155 (15%)
PTKc_EphR 736..1002 CDD:270629 116/347 (33%)
SAM_1 1029..1092 CDD:425739 6/16 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.