DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZNF236 and salm

DIOPT Version :9

Sequence 1:NP_001293018.1 Gene:ZNF236 / 7776 HGNCID:13028 Length:1847 Species:Homo sapiens
Sequence 2:NP_723670.2 Gene:salm / 34569 FlyBaseID:FBgn0261648 Length:1365 Species:Drosophila melanogaster


Alignment Length:1639 Identity:315/1639 - (19%)
Similarity:482/1639 - (29%) Gaps:626/1639 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   336 PLQQTEAQATSASSQPSSQAVSDVIQQLLELSEPAPVESGQSPQPGQQLSITVGINQDILQQALE 400
            |:.:..|:..:....|..:...||     |:....|.|:..|..|..::::..|....:..:|::
  Fly   149 PVAEASAEEAATERTPEKEKEKDV-----EVDVEKPDEAPSSAVPSTEVTLPGGAGAPVTLEAIQ 208

Human   401 NSGLSSIPAAAHPNDSCHAKTSAPHAQNPD----------------------------------- 430
            |..::....|        |||.|..:...|                                   
  Fly   209 NMQMAIAQFA--------AKTIANGSNGADNEAAMKQLAFLQQTLFNLQQQQLFQIQLIQQLQSQ 265

Human   431 --VSSVSNEQTDPTDAEQEKEQESP-------------EKLDKKEKKMIKKK------SPFLPGS 474
              ::....|:....||:||::||..             |...|.|.:|.:.|      :..:|  
  Fly   266 LALNQAKQEEDTEEDADQEQDQEQETDTYEEEERIADMELRQKAEARMAEAKARQHLINAGVP-- 328

Human   475 IREENGVRWHVCPYCAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKA 539
            :||.:|              .|::.::..|.|.||.                             
  Fly   329 LRESSG--------------SPAESLKRRREHDHES----------------------------- 350

Human   540 FKCQYCMKSFSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHIASHFKHTELRKMRHQRK 604
                                      :|...|..|         .||.|...:.. |.|::... 
  Fly   351 --------------------------QPNRRPSLD---------NTHKADTAQDA-LAKLKEME- 378

Human   605 PAKVRVGKTNIPVP--------------DIPLQEPILITDLGLIQPIPK---NQFFQSYFNNNFV 652
                     |.|:|              |:|  ||   ..|.|:|...:   :...|....|:..
  Fly   379 ---------NTPLPFGSDLASSIITNHDDLP--EP---NSLDLLQKRAQEVLDSASQGILANSMA 429

Human   653 ---------------NEADRPYKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQCGRGFVSAGVL 702
                           ||....::|.||.:.:.....|:.||||||||:||||:.||..|.:.|.|
  Fly   430 DDFAFGEKSGEGKGRNEPFFKHRCRYCGKVFGSDSALQIHIRSHTGERPFKCNVCGSRFTTKGNL 494

Human   703 KAHIRTHTGLKSFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNC---KKHMKT 764
            |.|.:.|                                      .||.....:|.   .:||..
  Fly   495 KVHFQRH--------------------------------------AQKFPHVPMNATPIPEHMDK 521

Human   765 HRYELAQQLQQHQQAASIDDSTVDQQSMQASTQMQVEIESDELPQTAEVVAANPEAMLDLE---- 825
            ....|..|:       |..||:.:              .|...|......|:.|.|...|:    
  Fly   522 FHPPLLDQM-------SPTDSSPN--------------HSPAPPPLGSAPASFPPAFPGLQNLYR 565

Human   826 -PQHVVGTEEAGLGQQLADQPLEADEDGFVAPQDPLRGHVDQFEEQSPAQQSFEPAGLPQGFTVT 889
             |..::.:..|....|...|.|..|          ||....|.:|..|                 
  Fly   566 PPMEILKSLGAAAPHQYFPQELPTD----------LRKPSPQLDEDEP----------------- 603

Human   890 DTYHQQPQFPPVQQLQDSSTLESQALSTSFHQQSLLQA--PSSDGMNVTTRLIQESSQEELDLQA 952
                 |.:..||::......          |:|.:.:.  |..:.:.:..|:.:|..:|    |.
  Fly   604 -----QVKNEPVEEKDQREE----------HEQEMAECSEPEPEPLPLEVRIKEERVEE----QE 649

Human   953 QGSQFLEDNEDQSRR--SYRCDYCNKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSH 1015
            |..|  ||:..:.||  |...::      :|.|  .|..||.|..|....:.....:       |
  Fly   650 QVKQ--EDHRIEPRRTPSPSSEH------RSPH--HHRHSHMGYPPVVQPIQPAALM-------H 697

Human  1016 EKTHTGVKAFSCSVCNASFTTNGSLTRHMATHMSMKPYKCPFCEEGFRTTVHCKKHMKRHQTVPS 1080
            .::..|               :.|...|:.|...:.|.: .|..|.|.......|.:......|.
  Fly   698 PQSSPG---------------SQSHLDHLPTPGQLPPRE-DFFAERFPLNFTTAKMLSPEHHSPV 746

Human  1081 AVSATGETEGGDICMEEEEEHSDRNASRKSRPEVITFTEEETAQLAKIRPQESATVSEKVL-VQS 1144
            ...|.|....|   :.....|...:.:|.  |.......|..|.|.  ||..:....|..: |.:
  Fly   747 RSPAGGALPPG---VPPPPHHHPHHMARS--PFFNPIKHEMAALLP--RPHSNDNSWENFIEVSN 804

Human  1145 AAEKDRISELRDKQAELQDEPKHANCCTYCPKSFKKPSDLVRHVRIHTGEKPYKCDECGKSFTVK 1209
            ..|..::.||. |..::.|    .|.|..|.:.....|.|..|.|.||||:|:||..||::||.|
  Fly   805 TCETMKLKELM-KNKKISD----PNQCVVCDRVLSCKSALQMHYRTHTGERPFKCRICGRAFTTK 864

Human  1210 STLDCHVKTH----TGQKLFSCHVCSNAFSTKGSLKVHMRLHTG----AKPFKCPHCELRFRTSG 1266
            ..|..|:..|    ..:....|.||...:|....|:.|:|||||    ..|.:....|:|.....
  Fly   865 GNLKTHMAVHKIRPPMRNFHQCPVCHKKYSNALVLQQHIRLHTGEPTDLTPEQIQAAEIRDPPPS 929

Human  1267 RRKTHMQ-------FHY---------KPDPKKA--RKPMTRSSSEGLQPVNLLNSSSTDPNVFI- 1312
            ....|..       ||:         .|.|...  ...:...||:|....|:......|.:|.. 
  Fly   930 MMPGHFMNPFAAAAFHFGALPGGPGGPPGPNHGAHNGALGSESSQGDMDDNMDCGEDYDDDVSSE 994

Human  1313 -MNNSVLTGQFDQNLLQPGLVGQAILPASVSAGGDLTVSLTDGSLATLEGIQLQLAANLVGPNVQ 1376
             ::||.|..:.|::                .:|.|....|.:..|.                   
  Fly   995 HLSNSNLEQEGDRS----------------RSGDDFKSLLFEQKLR------------------- 1024

Human  1377 ISGIDAASINNITLQIDPSILQQTLQQGNLLAQQLTGEPGLAPQNSSLQTSDSTVPASVVIQPIS 1441
               |||..:.| |..:.|              :......|.:..::|..||.|...:|.||:   
  Fly  1025 ---IDATGVVN-TNPVRP--------------RSSASSHGHSVGSTSAPTSPSVHASSQVIK--- 1068

Human  1442 GLSLQPTVTSANLTIGPLSEQDSVLTTNSSGTQDLTQVMTSQGLVSPSGGPHEITLTINNSSLSQ 1506
             .|..|..:.|                 |.|..|||                             
  Fly  1069 -RSSSPARSEA-----------------SQGALDLT----------------------------- 1086

Human  1507 VLAQAAGPTATSSSGSPQEITLTISELNTTSGSLPSTTPMSPSAISTQNLVMSSSGVGGDASVTL 1571
               ..|.||::|||.||                ||...|:||                       
  Fly  1087 ---PRAAPTSSSSSRSP----------------LPKEKPVSP----------------------- 1109

Human  1572 TLADTQGMLSGGLDTVTLNITSQGQQFPALLTDPSLSGQGGAGSPQVILVSHTPQSASAACEEIA 1636
                                       |:|...||.|....|.    ||.|..|.:....|    
  Fly  1110 ---------------------------PSLPRSPSGSSHASAN----ILTSPLPPTVGIDC---- 1139

Human  1637 YQVAGVSGNLAPGNQPEKEGRAHQCLECDRAFSSAAVLMHHSKE----VH-GRERIH-------- 1688
                     |.||.|...:.:....::...|.::||...||..:    :| .:|::.        
  Fly  1140 ---------LPPGLQHHLQQQHQHLMQQQAAVAAAAAAQHHHHQQMAALHQHQEQLRREAAEAQQ 1195

Human  1689 ------GCPVCRKAFKRATHLKEHMQTHQAGPS-------LSSQKP--------RVFKCDTCEKA 1732
                  .......|.:|.|..:...|..:.||.       |...:|        .:|...|.:..
  Fly  1196 KAAAAAAAAAAAAAAQRQTPPQARDQRQEGGPGAGPPPNPLMGARPPFGMFPNLPLFPPATTQNM 1260

Human  1733 FAKPSQLERHSRIHTGERPFH------------CTLCEKAFNQKSALQVHMKKHTGERPYKCAYC 1785
            ....:|:   ::......||:            |.:|.|.|...|||::|.:.||.|||:||:.|
  Fly  1261 CNAMNQI---AQSVMPAAPFNPLALSGVRGSTTCGICYKTFPCHSALEIHYRSHTKERPFKCSIC 1322

Human  1786 VMGFTQKSNMKLHM 1799
            ..|||.|.|:|.||
  Fly  1323 DRGFTTKGNLKQHM 1336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZNF236NP_001293018.1 C2H2 Zn finger 41..61 CDD:275368
COG5048 <52..234 CDD:227381
C2H2 Zn finger 70..90 CDD:275368
C2H2 Zn finger 97..117 CDD:275368
C2H2 Zn finger 125..145 CDD:275370
C2H2 Zn finger 157..177 CDD:275368
COG5048 197..707 CDD:227381 85/458 (19%)
zf-C2H2 199..221 CDD:278523
C2H2 Zn finger 201..221 CDD:275368
zf-H2C2_2 214..238 CDD:290200
C2H2 Zn finger 229..249 CDD:275368
zf-H2C2_2 241..266 CDD:290200
C2H2 Zn finger 257..278 CDD:275368
C2H2 Zn finger 289..310 CDD:275368
C2H2 Zn finger 486..506 CDD:275368 2/19 (11%)
zf-H2C2_2 498..522 CDD:290200 4/23 (17%)
C2H2 Zn finger 514..534 CDD:275368 0/19 (0%)
zf-H2C2_2 527..551 CDD:290200 0/23 (0%)
C2H2 Zn finger 542..562 CDD:275368 0/19 (0%)
zf-H2C2_2 554..579 CDD:290200 3/24 (13%)
C2H2 Zn finger 570..590 CDD:275368 5/19 (26%)
COG5048 653..1057 CDD:227381 83/415 (20%)
C2H2 Zn finger 661..681 CDD:275368 7/19 (37%)
zf-H2C2_2 673..698 CDD:290200 16/24 (67%)
C2H2 Zn finger 689..709 CDD:275368 8/19 (42%)
C2H2 Zn finger 717..737 CDD:275368 0/19 (0%)
zf-H2C2_2 729..754 CDD:290200 2/24 (8%)
C2H2 Zn finger 745..765 CDD:275368 5/22 (23%)
COG5048 953..1315 CDD:227381 90/392 (23%)
zf-C2H2 969..991 CDD:278523 3/21 (14%)
C2H2 Zn finger 971..991 CDD:275368 3/19 (16%)
zf-H2C2_2 983..1008 CDD:290200 6/24 (25%)
C2H2 Zn finger 999..1019 CDD:275368 1/19 (5%)
C2H2 Zn finger 1027..1047 CDD:275368 2/19 (11%)
zf-H2C2_2 1039..1064 CDD:290200 7/24 (29%)
C2H2 Zn finger 1171..1191 CDD:275368 6/19 (32%)
zf-H2C2_2 1183..1207 CDD:290200 12/23 (52%)
C2H2 Zn finger 1199..1219 CDD:275368 8/19 (42%)
C2H2 Zn finger 1227..1247 CDD:275368 7/19 (37%)
zf-H2C2_2 1239..1264 CDD:290200 10/28 (36%)
C2H2 Zn finger 1255..1275 CDD:275370 3/26 (12%)
C2H2 Zn finger 1661..1682 CDD:275368 5/24 (21%)
C2H2 Zn finger 1690..1710 CDD:275368 4/19 (21%)
COG5048 1707..>1775 CDD:227381 18/94 (19%)
C2H2 Zn finger 1726..1746 CDD:275368 2/19 (11%)
zf-H2C2_2 1739..1763 CDD:290200 6/35 (17%)
C2H2 Zn finger 1754..1774 CDD:275368 8/19 (42%)
zf-H2C2_2 1766..1791 CDD:290200 13/24 (54%)
C2H2 Zn finger 1782..1800 CDD:275368 10/18 (56%)
salmNP_723670.2 zf-C2H2 451..473 CDD:278523 7/21 (33%)
C2H2 Zn finger 453..473 CDD:275368 7/19 (37%)
zf-H2C2_2 465..490 CDD:290200 16/24 (67%)
C2H2 Zn finger 481..501 CDD:275368 8/19 (42%)
C2H2 Zn finger 826..846 CDD:275368 6/19 (32%)
zf-H2C2_2 838..863 CDD:290200 13/24 (54%)
zf-C2H2_2 854..922 CDD:289522 21/67 (31%)
C2H2 Zn finger 854..874 CDD:275368 8/19 (42%)
C2H2 Zn finger 886..906 CDD:275368 7/19 (37%)
C2H2 Zn finger 1291..1311 CDD:275368 8/19 (42%)
zf-H2C2_2 1303..1328 CDD:290200 13/24 (54%)
C2H2 Zn finger 1319..1339 CDD:275368 10/18 (56%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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