DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh10 and Mhc

DIOPT Version :9

Sequence 1:XP_006534552.1 Gene:Myh10 / 77579 MGIID:1930780 Length:2007 Species:Mus musculus
Sequence 2:NP_001162991.1 Gene:Mhc / 35007 FlyBaseID:FBgn0264695 Length:1962 Species:Drosophila melanogaster


Alignment Length:1981 Identity:786/1981 - (39%)
Similarity:1194/1981 - (60%) Gaps:91/1981 - (4%)


- Green bases have known domain annotations that are detailed below.


Mouse     8 EDPERYLFV-------DRAVIYNPATQADWTAKKLVWIPSERHGFEAASIKEERGDEVMVELAEN 65
            |||..||||       |::..|:        :||..|||.|:.|:....||..:||.|.|.| :.
  Fly    11 EDPTPYLFVSLEQRRIDQSKPYD--------SKKSCWIPDEKEGYLLGEIKATKGDIVSVGL-QG 66

Mouse    66 GKKAMVNKDDIQKMNPPKFSKVEDMAELTCLNEASVLHNLKDRYYSGLIYTYSGLFCVVINPYKN 130
            |:...:..:.::|:|||||.|:||||::|.||...|||||:.|||:.|||||||||||.|||||.
  Fly    67 GEVRDIKSEKVEKVNPPKFEKIEDMADMTVLNTPCVLHNLRQRYYAKLIYTYSGLFCVAINPYKR 131

Mouse   131 LPIYSENIIEMYRGKKRHEMPPHIYAISESAYRCMLQDREDQSILCTGESGAGKTENTKKVIQYL 195
            .|:|:....:|||||:|:|:||||:|||:.||..||.:..:||:|.||||||||||||||||.|.
  Fly   132 YPVYTNRCAKMYRGKRRNEVPPHIFAISDGAYVDMLTNHVNQSMLITGESGAGKTENTKKVIAYF 196

Mouse   196 AHVASSHKGRKDHNIPQESPKPVKPQGELERQLLQANPILESFGNAKTVKNDNSSRFGKFIRINF 260
            |.|.:|.|          :.:..|.:|.||.|::|.||:||:|||||||:|||||||||||||:|
  Fly   197 ATVGASKK----------TDEAAKSKGSLEDQVVQTNPVLEAFGNAKTVRNDNSSRFGKFIRIHF 251

Mouse   261 DVTGYIVGANIETYLLEKSRAVRQAKDERTFHIFYQLLSGAGEHLKS-DLLLEGFNNYRFLSNGY 324
            ..||.:.||:||||||||:|.:.|...||::|||||::||:...:|. .||.:...:|..:|.|.
  Fly   252 GPTGKLAGADIETYLLEKARVISQQSLERSYHIFYQIMSGSVPGVKDICLLTDNIYDYHIVSQGK 316

Mouse   325 IPIPGQQDKDNFQETMEAMHIMGFSHEEILSMLKVVSSVLQFGNISFKKERNTDQASMPENTVAQ 389
            :.:....|.:.|..|.:|..|:||:.:|...:.::.::|:..|.:.||:....:||.........
  Fly   317 VTVASIDDAEEFSLTDQAFDILGFTKQEKEDVYRITAAVMHMGGMKFKQRGREEQAEQDGEEEGG 381

Mouse   390 KLCHLLGMNVMEFTRAILTPRIKVGRDYVQKAQTKEQADFAVEALAKATYERLFRWLVHRINKAL 454
            ::..|.|.:..|..:.:|.||||||.::|.:.:..:|...::.||.|..::|||:|||.:.|:.|
  Fly   382 RVSKLFGCDTAELYKNLLKPRIKVGNEFVTQGRNVQQVTNSIGALCKGVFDRLFKWLVKKCNETL 446

Mouse   455 DRTKRQGASFIGILDIAGFEIFELNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFI 519
            | |:::...|||:||||||||||.|.|||||||:|||||||.|||.||:||||||:||||:|.||
  Fly   447 D-TQQKRQHFIGVLDIAGFEIFEYNGFEQLCINFTNEKLQQFFNHHMFVLEQEEYKREGIDWAFI 510

Mouse   520 DFGLDLQPCIDLIERPANPPGVLALLDEECWFPKATDKTFVEKLVQEQ-GSHSKFQKPRQLK--- 580
            |||:||..||||||:|.   |:|::|:||..||||||:||.|||.... |..:.||||:..|   
  Fly   511 DFGMDLLACIDLIEKPM---GILSILEEESMFPKATDQTFSEKLTNTHLGKSAPFQKPKPPKPGQ 572

Mouse   581 DKADFCIIHYAGKVDYKADEWLMKNMDPLNDNVATLLHQSSDRFVAELWKDEIQTIQRASFYDSV 645
            ..|.|.|.||||.|.|....||.||.|||||.|.....:|.::.:.|::.|....          
  Fly   573 QAAHFAIAHYAGCVSYNITGWLEKNKDPLNDTVVDQFKKSQNKLLIEIFADHAGQ---------- 627

Mouse   646 SGLHEPPVDRIVGLDQVTGMTETAFGSAYKTKKGMFRTVGQLYKESLTKLMATLRNTNPNFVRCI 710
                             :|..|.|.|...| |.|.|.||...|||.|..||.|||:|.|:|||||
  Fly   628 -----------------SGGGEQAKGGRGK-KGGGFATVSSAYKEQLNSLMTTLRSTQPHFVRCI 674

Mouse   711 IPNHEKRAGKLDPHLVLDQLRCNGVLEGIRICRQGFPNRIVFQEFRQRYEILTPNAIPKGFMDGK 775
            |||..|:.|.:|.|||:.||.||||||||||||:|||||:::.:|:.||:|:.|..: :|....|
  Fly   675 IPNEMKQPGVVDAHLVMHQLTCNGVLEGIRICRKGFPNRMMYPDFKMRYKIMCPKLL-QGVEKDK 738

Mouse   776 QACERMIRALELDPNLYRIGQSKIFFRAGVLAHLEEERDLKITDIIIFFQAVCRGYLARKAFAKK 840
            :|.|.:|:.::|..:.||:|.:|:|||||||..:||.||.::..|:.:.||..||||:||.|.|.
  Fly   739 KATEIIIKFIDLPEDQYRLGNTKVFFRAGVLGQMEEFRDERLGKIMSWMQAWARGYLSRKGFKKL 803

Mouse   841 QQQLSALKVLQRNCAAYLKLRHWQWWRVFTKVKPLLQVTRQEEELQAKDEELLKVKE---KQTKV 902
            |:|..||||:|||...||:||.|.|::::.||||||.|:|.|:|:...:|:..|.:|   .:.||
  Fly   804 QEQRVALKVVQRNLRKYLQLRTWPWYKLWQKVKPLLNVSRIEDEIARLEEKAKKAEELHAAEVKV 868

Mouse   903 EGELEEMERKHQQLLEEKNILAEQLQAETELFAEAEEMRARLAAKKQELEEILHDLESRV-EEEE 966
            ..|||.:..|   ||.||..|.:.|..|.....:.:|..|:|.|:|.:||..|.|::.|: :||:
  Fly   869 RKELEALNAK---LLAEKTALLDSLSGEKGALQDYQERNAKLTAQKNDLENQLRDIQERLTQEED 930

Mouse   967 ERNQILQNEKKKMQAHIQDLEEQLDEEEGARQKLQLEKVTAEAKIKKMEEEVLLLEDQNSKFIKE 1031
            .|||:.| :|||....|..|::.:::.|...||.:.:|.|.:.:|:.:.:|:...::..:|..||
  Fly   931 ARNQLFQ-QKKKADQEISGLKKDIEDLELNVQKAEQDKATKDHQIRNLNDEIAHQDELINKLNKE 994

Mouse  1032 KKLMEDRIAECSSQLAEEEEKAKNLAKIRNKQEVMISDLEERLKKEEKTRQELEKAKRKLDGETT 1096
            ||:..:...:...:|...|:|..:|.|::.|.|..:.:||:.|::|:|.|.::||:|||::|:..
  Fly   995 KKMQGETNQKTGEELQAAEDKINHLNKVKAKLEQTLDELEDSLEREKKVRGDVEKSKRKVEGDLK 1059

Mouse  1097 DLQDQIAELQAQVDELKVQLTKKEEELQGALARGDDETLHKNNALKVARELQAQIAELQEDFESE 1161
            ..|:.:|:|:....||:..:.:|::||....|:.:||.:......:..:||||:|.||:|:.|:|
  Fly  1060 LTQEAVADLERNKKELEQTIQRKDKELSSITAKLEDEQVVVLKHQRQIKELQARIEELEEEVEAE 1124

Mouse  1162 KASRNKAEKQKRDLSEELEALKTELEDTLDTTAAQQELRTKREQEVAELKKALEDETKNHEAQIQ 1226
            :.:|.|||||:.||:.|||.|...||:....|:||.||..|||.|:::|::.||:....||:.:.
  Fly  1125 RQARAKAEKQRADLARELEELGERLEEAGGATSAQIELNKKREAELSKLRRDLEEANIQHESTLA 1189

Mouse  1227 DMRQRHATALEELSEQLEQAKRFKANLEKNKQGLETDNKELACEVKVLQQVKAESEHKRKKLDAQ 1291
            ::|::|..|:.|::||::|..:.||..||.|........:|...|..:...||..|...|:|...
  Fly  1190 NLRKKHNDAVAEMAEQVDQLNKLKAKAEKEKNEYYGQLNDLRAGVDHITNEKAAQEKIAKQLQHT 1254

Mouse  1292 VQELHAKVSEGDRLRVELAEKANKLQNELDNVSTLLEEAEKKGIKFAKDAAGLESQLQDTQELLQ 1356
            :.|:.:|:.|.:|...:......||..|..::...|||||.:..:.:|....|.:||:||:.|..
  Fly  1255 LNEVQSKLDETNRTLNDFDASKKKLSIENSDLLRQLEEAESQVSQLSKIKISLTTQLEDTKRLAD 1319

Mouse  1357 EETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDDD-LGTIES 1420
            ||:|::..|..:.|.||.:.::|:||.|||.|.:.:|::|:....::....:.|.:.| :...|.
  Fly  1320 EESRERATLLGKFRNLEHDLDNLREQVEEEAEGKADLQRQLSKANAEAQVWRSKYESDGVARSEE 1384

Mouse  1421 LEEAKKKL---LKDVEALSQRLEEKVLAYDKLEKTKNRLQQELDDLTVDLDHQRQIVSNLEKKQK 1482
            |||||:||   |.:.|...:.|.:|.:.   |||||.||..|::||.:::|....|.:..|||||
  Fly  1385 LEEAKRKLQARLAEAEETIESLNQKCIG---LEKTKQRLSTEVEDLQLEVDRANAIANAAEKKQK 1446

Mouse  1483 KFDQLLAEEKGISARYAEERDRAEAEAREKETKALSLARALEEALEAKEEFERQNKQLRADMEDL 1547
            .||:::.|.|......|.|.|.::.|.|...|:...|..|.||..|..|...|:||.|..:::||
  Fly  1447 AFDKIIGEWKLKVDDLAAELDASQKECRNYSTELFRLKGAYEEGQEQLEAVRRENKNLADEVKDL 1511

Mouse  1548 MSSKDDVGKNVHELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQ 1612
            :....:.|:|:||:||:::.||.:.:|::..|||.|..|:..|:..||.::.:..::.:.:|.:|
  Fly  1512 LDQIGEGGRNIHEIEKARKRLEAEKDELQAALEEAEAALEQEENKVLRAQLELSQVRQEIDRRIQ 1576

Mouse  1613 TRDEQNEEKKRLLLKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDEVIKQ 1677
            .::|:.|..::...:.:..::|.||.|.|.:|.|:..|||:|.|:.:||..::.||||..|..|.
  Fly  1577 EKEEEFENTRKNHQRALDSMQASLEAEAKGKAEALRMKKKLEADINELEIALDHANKANAEAQKN 1641

Mouse  1678 LRKLQAQMKDYQRELEEARASRDEIFAQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERD 1742
            :::.|.|:||.|..|||.:.:||:...|...||::..:|:.|:.:.:..|..::|.||.|||   
  Fly  1642 IKRYQQQLKDIQTALEEEQRARDDAREQLGISERRANALQNELEESRTLLEQADRGRRQAEQ--- 1703

Mouse  1743 ELAD--EIANSASGKSALLD-EKRRLEARIAQLEEELEE---EQSNMELLNDRFRKTTLQVDTLN 1801
            ||||  |..|..|.::|.:. .||:||:.:..|..:|:|   |..|.|   ::.:|..:....|.
  Fly  1704 ELADAHEQLNEVSAQNASISAAKRKLESELQTLHSDLDELLNEAKNSE---EKAKKAMVDAARLA 1765

Mouse  1802 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAKIGQLEEQLEQEAK 1866
            .||.||:..||..:..|:.||:|.|||:.:|.|.|.......|..|..||.::.:||.:|:.|.:
  Fly  1766 DELRAEQDHAQTQEKLRKALEQQIKELQVRLDEAEANALKGGKKAIQKLEQRVRELENELDGEQR 1830

Mouse  1867 ERAAANKLVRRTEKKLKEIFMQVEDERRHADQYKEQMEKANARMKQLKRQLEEAEEEATRANASR 1931
            ..|.|.|.:|::|:::||:..|.|::|::.::.::.::|...::|..|||:|||||.|....|..
  Fly  1831 RHADAQKNLRKSERRVKELSFQSEEDRKNHERMQDLVDKLQQKIKTYKRQIEEAEEIAALNLAKF 1895

Mouse  1932 RKLQRELDDATEANEGLSREVSTLKNRLRRG 1962
            ||.|:||::|.|..:...:.:|..:.:.|.|
  Fly  1896 RKAQQELEEAEERADLAEQAISKFRAKGRAG 1926

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh10XP_006534552.1 Myosin_N 33..72 CDD:397036 15/38 (39%)
MYSc_Myh10 99..802 CDD:276952 339/707 (48%)
Myosin_tail_1 879..1959 CDD:396244 364/1093 (33%)
MhcNP_001162991.1 Myosin_N 36..73 CDD:280832 14/37 (38%)
MYSc 81..777 CDD:214580 360/738 (49%)
MYSc_Myh1_insects_crustaceans 100..765 CDD:276874 339/707 (48%)
Myosin_tail_1 842..1897 CDD:279860 356/1067 (33%)
V_Alix_like 1557..1877 CDD:187408 104/325 (32%)
ATP-synt_B <1671..1771 CDD:304375 33/105 (31%)
TMPIT 1739..>1825 CDD:285135 29/88 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D47111at2759
OrthoFinder 1 1.000 - - FOG0000014
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100110
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X58
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.720

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