| Sequence 1: | NP_008909.1 | Gene: | RNF113A / 7737 | HGNCID: | 12974 | Length: | 343 | Species: | Homo sapiens |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_650865.1 | Gene: | mdlc / 42397 | FlyBaseID: | FBgn0038772 | Length: | 357 | Species: | Drosophila melanogaster |
| Alignment Length: | 330 | Identity: | 187/330 - (56%) |
|---|---|---|---|
| Similarity: | 227/330 - (68%) | Gaps: | 16/330 - (4%) |
- Green bases have known domain annotations that are detailed below.
|
Human 16 TFLFKKPG-RKGAAGRRKRPACDPEPGESGSSSDE-----GCTVVRPEKKRVTHNPMIQKTRDSG 74
Human 75 KQKAAYGDLSSE-EEEENEPESLGVVYKSTRSAKPVGPEDMGATAVYELDTEKERDAQAIFERSQ 138
Human 139 KIQEELRGKEDDKIYRGINNYQKYMKPKDTSMGNASSGMVRKGPIRAPEHLRATVRWDYQPDICK 203
Human 204 DYKETGFCGFGDSCKFLHDRSDYKHGWQIERELDEGRYGVY----EDENYEVGSDDEEIPFKCFI 264
Human 265 CRQSFQNPVVTKCRHYFCESCALQHFRTTPRCYVCDQQTNGVFNPAKELIAKLEKHRATGEGGAS 329
Human 330 DLPED 334 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| RNF113A | NP_008909.1 | Important for interaction with SNRNP200/BRR2. /evidence=ECO:0000269|PubMed:29144457 | 2..60 | 19/49 (39%) | |
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 22..96 | 23/80 (29%) | |||
| COG5152 | 30..322 | CDD:227481 | 176/301 (58%) | ||
| Important for interaction with CXCR4. /evidence=ECO:0000269|PubMed:28978524 | 50..61 | 3/10 (30%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 322..343 | 4/13 (31%) | |||
| mdlc | NP_650865.1 | COG5152 | <181..320 | CDD:227481 | 97/138 (70%) |
| zf-CCCH | 195..221 | CDD:279036 | 24/25 (96%) | ||
| zf-RING_5 | 263..303 | CDD:291308 | 26/39 (67%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 1 | 0.930 | - | - | C165151985 | |
| Domainoid | 1 | 1.000 | 178 | 1.000 | Domainoid score | I3574 |
| eggNOG | 1 | 0.900 | - | - | E1_COG5152 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 1 | 1.050 | 369 | 1.000 | Inparanoid score | I2145 |
| Isobase | 1 | 0.950 | - | 0 | Normalized mean entropy | S1119 |
| OMA | 1 | 1.010 | - | - | QHG55322 | |
| OrthoDB | 1 | 1.010 | - | - | D1420266at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0003160 | |
| OrthoInspector | 1 | 1.000 | - | - | otm40868 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_102529 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR12930 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2079 |
| SonicParanoid | 1 | 1.000 | - | - | X2126 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 1 | 0.960 | - | - | ||
| User_Submission | 0 | 0.000 | Not matched by this tool. | |||
| 16 | 15.750 | |||||