DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and gbp2

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:XP_699217.3 Gene:gbp2 / 570622 ZFINID:ZDB-GENE-070912-618 Length:625 Species:Danio rerio


Alignment Length:482 Identity:90/482 - (18%)
Similarity:161/482 - (33%) Gaps:166/482 - (34%)


- Green bases have known domain annotations that are detailed below.


Human   136 PLLLVRINASGGLILRMGAINRCLKHPLARD------TPVCLLAVLGEQHSGKSFLLNHLLQGLP 194
            |:.|:..:..|.|         |:|.. |:|      .||.:::|:|...:|||:|:|.|.....
Zfish    10 PVCLIENDEFGKL---------CVKKE-AKDILDEINEPVVVVSVVGLYRTGKSYLMNRLAGKQS 64

Human   195 GLESGEGGRPRGGEASLQGCRWGANGLARGIWMW--SHPFLLGKEGKKVAVFLVDT---GDAMSP 254
            |...|.                ......:|||||  .||   .|:|.  .:.|:||   ||....
Zfish    65 GFALGS----------------TIESKTKGIWMWCVPHP---DKKGH--TLVLLDTEGLGDVDKG 108

Human   255 ELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRD 319
            :...:|.| .| |..:|||..:.::...:.:..|:.|.....:.|              ::.|:.
Zfish   109 DEKHDTWI-FC-LAVLLSSALVYNSLGVIDNMALEKLHYVTELTE--------------NIRVKS 157

Human   320 SSHPNKAGQGHVGNIFQS----------------TPLAASQRL-------SGRYPKVQELLQGKR 361
            ..:.::........:|.|                .|:.:.:.|       .|..|::.:....:|
Zfish   158 EGNQDEDESEEFMRVFPSFVWAVRDFTLELKMDDKPITSDEYLESALKLKKGHSPQIAQYNLPRR 222

Human   362 A--------RCCLLPAPG----RRRMNQGHASPGDTDDDFRHLLGAYVSDVLSAAPQHAKSRCQG 414
            .        :|.:.|.|.    .:||..  .:.|:.|.:|.               |.|.:.|..
Zfish   223 CLREFFAPRKCFVFPRPASTQDMKRMED--LTEGELDSEFL---------------QQANTFCSY 270

Human   415 YWN--EGRAVARGDRRLLTGQQL-------AQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVE 470
            .::  |.:.|..|  |.:||..|       .:.|::     |:. |...:.....|::.::|.||
Zfish   271 IYDSTEPKTVKGG--RTITGTALGNLAEVYVEAIRS-----GKV-PCLENAVVSLAKIQNVRAVE 327

Human   471 -----------------------------AAKREFEEYVRQQDVATKRIFSALRVLPDTMRNLLS 506
                                         |.|:..||::........:|:.     .:.|..:.:
Zfish   328 QALQIYMTEMLSMAQLPLDPEELSSIHTLAEKKAIEEFINMSFNDNDQIYQ-----QELMGKIHN 387

Human   507 TQKDAILARHGVALLCKGRDQTLEALE 533
            ..:|.....|..:|:     |..|.||
Zfish   388 EYQDLCQQNHQASLM-----QCQEVLE 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 54/284 (19%)
gbp2XP_699217.3 None
Blue background indicates that the domain is not in the aligned region.

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