DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and gbp3

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:XP_073775327.1 Gene:gbp3 / 563072 ZFINID:ZDB-GENE-070912-176 Length:1031 Species:Danio rerio


Alignment Length:394 Identity:77/394 - (19%)
Similarity:142/394 - (36%) Gaps:123/394 - (31%)


- Green bases have known domain annotations that are detailed below.


Human   136 PLLLVRINASGGLILRMGA---INRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGL-PGL 196
            |:.|:..:..|.|.::..|   ::|.::       ||.:::|:|...:|||:|:| ||.|| .|.
Zfish    76 PVCLIENDGFGKLSVKKQAKDILDRIIE-------PVVVVSVVGPHRTGKSYLVN-LLAGLQTGF 132

Human   197 ESGEGGRPRGGEASLQGCRWGANGLARGIWMW--SHPFLLGKEGKKVAVFLVDT---GDAMSPEL 256
            ..|                :......:|||||  .||   .|:|.  .:.|:||   ||....| 
Zfish   133 SLG----------------YTIESETKGIWMWCIPHP---TKKGH--TLVLLDTEGLGDVQEKE- 175

Human   257 SRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRDSS 321
             :..:...| |..:|||..:.::...:.|..::.|            ||    :..|...:|..:
Zfish   176 -KNDKWIFC-LAVLLSSVLVYNSLGVIDDEAVEKL------------HY----VTELPENIRVKA 222

Human   322 HPNKAGQGHVGNIFQSTPLAASQ-----RLSGRYPKVQELLQG---------------------- 359
            ..::.......::|.|...|...     .:...:....|.|:.                      
Zfish   223 EGDEDESAEFMHVFPSFVWAVQDFDLEFEIEDEWMTSDEYLESALKLKKGHSLGTQRYNLPRRCL 287

Human   360 ----KRARCCLLPAPGRRRMNQGHASPGDTDDDFR-----HLLGAYVSDVLSAAPQHAKSRCQGY 415
                .:.:|.|.|.|..|:..:......|...|.|     |...:|:.|  :|.|:..:    |:
Zfish   288 CEFFAQKKCFLFPRPAYRKYMRRLEDLSDETLDSRFLHQAHTFCSYIYD--NAQPKTVR----GH 346

Human   416 WNEGRAVARGD------RRLLTGQQLAQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKR 474
            ...|.|:  |:      ..:.:|..:..|...:|                .|::.::|.|:.|::
Zfish   347 TITGTAL--GNLAEIYVEAISSGNVICLENAVVS----------------LAKIQNVRAVDQARQ 393

Human   475 EFEE 478
            .::|
Zfish   394 IYKE 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 57/280 (20%)
gbp3XP_073775327.1 None
Blue background indicates that the domain is not in the aligned region.

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