DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and gbp4

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:NP_001038355.1 Gene:gbp4 / 559296 ZFINID:ZDB-GENE-060531-46 Length:618 Species:Danio rerio


Alignment Length:172 Identity:48/172 - (27%)
Similarity:73/172 - (42%) Gaps:36/172 - (20%)


- Green bases have known domain annotations that are detailed below.


Human   135 EPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGLESG 199
            :|:.|:...:.|.|.::..|: :.|:.   ...||.::||:|...:|||||:|.|.....|....
Zfish     3 KPVCLIDTGSDGKLCVQQAAL-QVLQQ---IQQPVVVVAVVGPYRTGKSFLMNRLAGKRTGFALS 63

Human   200 EGGRPRGGEASLQGCRWGANGLARGIWMW--SHPFLLGKEGKKVAVFLVDT---GDAMSPELSRE 259
            ...:|:                ..|||||  .||...|     ..:.|:||   ||....:..|:
Zfish    64 SNIKPK----------------TEGIWMWCVPHPTKAG-----TTLVLLDTEGLGDVEKGDSKRD 107

Human   260 TRIKLCALTTMLSS---YQILSTSQELKDTDLDYL-EMFVHV 297
            |.|  .:||.:|||   |....|...|....|.|: |:..|:
Zfish   108 TYI--FSLTVLLSSTLVYNSWGTIDNLAIEQLQYVTELIEHI 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 42/144 (29%)
gbp4NP_001038355.1 GBP 40..272 CDD:460516 38/131 (29%)
GBP_C 280..>402 CDD:293879
CARD_ASC_NALP1 532..614 CDD:260039
Blue background indicates that the domain is not in the aligned region.

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