DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNF112 and rnf112

DIOPT Version :9

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:XP_012825846.2 Gene:rnf112 / 548585 XenbaseID:XB-GENE-920329 Length:611 Species:Xenopus tropicalis


Alignment Length:635 Identity:197/635 - (31%)
Similarity:287/635 - (45%) Gaps:99/635 - (15%)


- Green bases have known domain annotations that are detailed below.


Human    13 HRLGK-RERKQSFMGNSGNSWSHTPFPKLELGLGPQPMAPR----------ELPTCSICLERLRD 66
            :|.|| |:||......:|:|           |.......|:          |..||||||:.|.|
 Frog    22 NRRGKRRQRKPKNPAGAGDS-----------GAASSAQQPQYREDSFSSLTEDITCSICLDDLTD 75

Human    67 PISLDCGHDFCIRCFSTHRLPGCEPP---CCPECRKIC----------------KQKRGLRSLGE 112
            |:.:.|||.||..|.:||.  |...|   .|||||..|                |.|:|::....
 Frog    76 PVYIACGHTFCRGCITTHW--GTPHPHGYLCPECRASCPRNHIVPDYRLGNLVSKIKQGIQERNA 138

Human   113 KMK-LLPQRPLPPALQETCPVRAEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLG 176
            ..: ||...|            ..|:.||..:.||.|.|.......|..:......||.||.::|
 Frog   139 MQEHLLAMEP------------DHPIQLVWADRSGRLNLNQSEACDCFLNTQYSHYPVFLLCIIG 191

Human   177 EQHSGKSFLLNHLLQGLPGLESGEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLLGKEGK 239
            |:..|||||:|::::.|..:|.||.......:.:|:|..|  |.....:|||||:.||:|..:|.
 Frog   192 EKRRGKSFLMNYIMRALRSMEMGEEFTLGADDEALKGFEWSPGTESTTKGIWMWNRPFILDHKGG 256

Human   240 KVAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKH 304
            |.||||:||..::.....|||.|||.||:..|||:.|.:.:..||:|:|||:||:::    ||:.
 Frog   257 KTAVFLLDTEGSLDIGSDRETCIKLSALSLFLSSHLIFNVASNLKETELDYMEMYLN----MGEE 317

Human   305 YGMVPIQHLDLLVRDSSHPNKAGQGHVGNIFQSTPLAASQRLSGRYPKVQELLQGKRARCCLLPA 369
            ||...:||||:|||| .:.:|.....|.:.:.|..:...|:.:. ||||...|:..:.||.|||.
 Frog   318 YGTQNLQHLDILVRD-WYNSKKWDRDVAHFYISREIENLQQRNS-YPKVLWSLKSNQTRCFLLPH 380

Human   370 PGRRRMNQGHASPGDTDDDFRHLLGAYVSDVLSAAPQHAKSRCQGYWNEGRAVARGDRRLLTGQQ 434
            ||:....:......|.|:||:..|.:||.:|:.....|.|....|             .:||...
 Frog   381 PGKGITGESKGRLQDMDEDFQESLRSYVYEVIRVVCTHIKLNVYG-------------EILTSAH 432

Human   435 LAQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKREFEEYVRQQDVATKRIFSALRVLPD 499
            :...:|.....:.|...||:||.||...:.:.|.:...:.||||:::.|...|         ||.
 Frog   433 IFSMLKEFMEVLDRQKYGFSSPMEMFYAIKNQRLMGDIENEFEEFLKNQSSLT---------LPP 488

Human   500 TMRNLLSTQKDAILARHGVALL---CKGRDQTLEALEAELQATAKAFMDSYTMRFCGHLAAVGGA 561
            |:|...|.:...:|.::..:||   ...|:..|..||..|....:.|...:|.||..:...||..
 Frog   489 TLRVKASEKYSELLVKYQQSLLGNSTSSREAMLMDLEVALLKRQEKFCSDFTTRFTMNAVGVGIT 553

Human   562 VGAGLMGLAGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVVGGGVGAG 611
            .|.|:.|:.|          |.||...:|.|...|.|||...|...|.:|
 Frog   554 AGLGVYGVLG----------AAAARGTVVLATQPVVATGGRAVAMEVASG 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING 56..101 CDD:238093 24/47 (51%)
GBP 163..402 CDD:206650 92/240 (38%)
rnf112XP_012825846.2 RING_Ubox 63..108 CDD:418438 22/46 (48%)
GBP 182..408 CDD:206650 89/231 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H5176
Inparanoid 1 1.050 312 1.000 Inparanoid score I10424
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D187713at32523
OrthoFinder 1 1.000 - - FOG0006675
OrthoInspector 1 1.000 - - otm55209
Panther 1 1.100 - - O PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3792
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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