DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and atl3

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:NP_001006016.2 Gene:atl3 / 449995 ZFINID:ZDB-GENE-041010-109 Length:513 Species:Danio rerio


Alignment Length:509 Identity:129/509 - (25%)
Similarity:199/509 - (39%) Gaps:87/509 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   132 VRAE--PLLLVRIN-ASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGL 193
            :|:|  |:.:|.:| ......|...|::|.|..|..||..|.:::|.|....||||||:.||:.:
Zfish     1 MRSEPGPVQIVTVNKEKHSFDLDTEALSRILLVPEVRDKHVVVVSVAGAFRKGKSFLLDFLLRYM 65

Human   194 ---PGLE-SGEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLL-GKEGKKVAVFLVDTGDA 251
               ||.: .|:...|      |.|..|  |:.....||.:||..|:: .|:|.:|||.|:||..|
Zfish    66 YRKPGQDWLGQDNDP------LTGFSWRGGSEPETTGIQLWSEVFVVRKKDGSEVAVLLMDTQGA 124

Human   252 MSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLL 316
            ...:.:.:....:.||:||.||.||.:.||.:::.||..|::|.....:....:.:.|.|.|..|
Zfish   125 FDSQSTVKDCATIFALSTMTSSVQIYNLSQNIQEDDLQQLQLFTEYGRLAMDEFFLKPFQSLMFL 189

Human   317 VRDSSHPNKAGQGHV-GNIFQSTPLAASQRLSGRYPKVQELLQG--KRARCCLLPAPGRRRMNQG 378
            |||.|.|.:...|.. |:.|....|...|........|:|.:..  ....|.|||.||.:..   
Zfish   190 VRDWSFPYEYKYGFKGGSSFLDKRLQVKQSQHEELQTVREHIHSCFTSISCFLLPHPGLKVA--- 251

Human   379 HASPG------DTDDDFRHLLGAYVSDVLSAAPQHAKS------RCQG-----------YWNEG- 419
             .||.      |...:|:..|...:.::|.......|.      .|:|           |..|| 
Zfish   252 -TSPAFTGQLCDVAPEFKEGLRELIPNLLKTDDLAVKEINGNKVTCRGLLEYFKAYIKIYQGEGL 315

Human   420 -------RAVARGDRRLLTGQQLAQEIKNL----SGWMGRTGPG----------------FTSPD 457
                   .|.|..:..........|..||:    .|.:....|.                |:|..
Zfish   316 PHPKSMLEATAEANNLAAVASAKDQYYKNMEKVCGGDLPYVAPNSLEEKHRFFLQEALHLFSSTK 380

Human   458 EMAAQLHDLRKVEAAKREFEEYVR--QQDVATKRIFSALRVLPDTMRNLLSTQKDAILARHGVAL 520
            :|..|....|..|..::|.:|...  .:...:|.:|||.|. |..:..|:.    .:....|: |
Zfish   381 KMGGQHFCHRYQEQLEKELKEMWENLSKHNESKNVFSAFRT-PAVLFVLVC----LLYVLSGI-L 439

Human   521 LCKGRDQTLEALEAELQATAKAFMDSYTMRFCGHLAAVGGAVGAGLMGLAGGVV 574
            ...|.:....|.:..:.....|.:....:|:.||...||.|:..     |.||:
Zfish   440 FFIGLETVSFACDCIVGLAMIAILTWAFIRYSGHYREVGTAIDQ-----ATGVI 488

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 76/254 (30%)
atl3NP_001006016.2 None
Blue background indicates that the domain is not in the aligned region.

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