DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and gbp1

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:XP_005171432.2 Gene:gbp1 / 436615 ZFINID:ZDB-GENE-040718-32 Length:622 Species:Danio rerio


Alignment Length:503 Identity:106/503 - (21%)
Similarity:171/503 - (33%) Gaps:165/503 - (32%)


- Green bases have known domain annotations that are detailed below.


Human   136 PLLLVRINASGGLILRMGAINRCLKHPLAR-DTPVCLLAVLGEQHSGKSFLLNHLLQGLPGLESG 199
            |:.||. |.:|.|.:...||:.     |:. :.||.:::|:|...:|||:|:|.|.....|...|
Zfish    10 PICLVE-NVNGSLSICKDAIDF-----LSNINEPVVVVSVVGLYRTGKSYLMNRLAGQQTGFALG 68

Human   200 EGGRPRGGEASLQGCRWGANGLARGIWMW--SHPFLLGKEGKKVAVFLVDT---GDAMSPELSRE 259
            .                ......:|||||  .||   .|:|.  .:.|:||   ||....:...:
Zfish    69 N----------------TIESKTKGIWMWCVPHP---KKQGH--TLVLLDTEGLGDVDKGDSKND 112

Human   260 TRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAE------------------------- 299
            ..| .| |..:|||..:.::...:.::.|:.|.....:.|                         
Zfish   113 GWI-FC-LAVLLSSTLVYNSRGTIDNSALEKLHYITELTEQIKIRTAEAADEEEDEEDSKFVLFF 175

Human   300 ---------------VMGKHYGMVPIQHLDLLVRDSSHPNKAGQGH------VGNIFQST----- 338
                           :.||:..  ..|:||..::.....||....:      :.|.|.|.     
Zfish   176 PSFTWVVRDFTLDLVIDGKNVN--EDQYLDFALQLRKGNNKKALEYNLPRQCIRNYFPSRKCFVF 238

Human   339 PLAASQRLSGRYPKVQEL--LQGKRARCCLLPAPGR-----------RRMNQGHASPGDTDDDFR 390
            |..||..      |:::|  ||.|......|...||           :.:..||...|..   ..
Zfish   239 PSPASPE------KMKQLESLQEKDLVPDFLEVTGRFCEHIFRNSVVKTLKGGHKVTGKL---LG 294

Human   391 HLLGAYVSDVLS----------AAPQHAKSRCQGYWNEGRAVARGDRRLLTGQQLAQEIKNLSGW 445
            ||...||..:.|          .|..:.:::|        ||....:....|.   :|:|     
Zfish   295 HLAKIYVDTISSGKVPCLDNAVVALANLENKC--------AVEEAFKVYERGM---EEVK----- 343

Human   446 MGRTGPGFTSPDEMAAQ---LHDLRKVEAAKREF----EEYVRQ---------------QDVATK 488
              :|.|  .:.||::::   ...|...|..||.|    :||:.|               ..:|:|
Zfish   344 --KTFP--VNVDEISSEHQRFSSLANAEFMKRSFKDEKQEYINQLKEKIDVYYGCLLEDNGLASK 404

Human   489 RIFSALRVLPDTMRNLLSTQKDAILAR-HGVALLCKGRDQTLEALEAE 535
            :....|  |.|....:....:|.:.:: .|..|.||.||..:|....|
Zfish   405 KKCEDL--LKDLFSEMNKKLQDGVYSQPGGYELYCKDRDVIVEKYRRE 450

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 64/308 (21%)
gbp1XP_005171432.2 None
Blue background indicates that the domain is not in the aligned region.

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