DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and atl2

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:NP_001103492.1 Gene:atl2 / 323665 ZFINID:ZDB-GENE-030131-6505 Length:599 Species:Danio rerio


Alignment Length:524 Identity:130/524 - (24%)
Similarity:202/524 - (38%) Gaps:92/524 - (17%)


- Green bases have known domain annotations that are detailed below.


Human   127 QETCPVRAEPLLLVRINASGGLI-LRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLL 190
            ::..|..|.|:.:|..|.:.... |...|:.:.|.....:|..|.:::|.|....||||||:.:|
Zfish    67 EDPVPEGARPIQIVITNENDHKFELDAAALEKILLQEHVKDLNVVVVSVAGAFRKGKSFLLDFML 131

Human   191 QGL--PGLESGEGGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLL-GKEGKKVAVFLVDTGD 250
            :.:  ...||..|    |.:..|.|..|  |......||..||..|:: .|:|.||||.||||..
Zfish   132 RYMHDQSAESWIG----GDDEPLTGFSWRGGCERETTGIQAWSEVFVVEKKDGTKVAVLLVDTQG 192

Human   251 AMSPELSRETRIKLC----ALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQ 311
            |    ...::.||.|    ||:||.||.|:.:.||.:::.||.:|::|.....:..:.....|.|
Zfish   193 A----FDSQSTIKDCATVFALSTMTSSVQVYNLSQNIQEDDLQHLQLFTEYGRLAMEEIYEKPFQ 253

Human   312 HLDLLVRDSSHPNKAGQG-HVGNIFQSTPLAASQRLSGRYPKVQELLQGKRAR---------CCL 366
            .|..|:||..:|.:...| ..||.|....|...|       ...|.||..|..         |.|
Zfish   254 KLLFLIRDWCYPYEHDYGLKGGNSFLERRLQVKQ-------NQHEELQNVRKHIHSCFSSIGCFL 311

Human   367 LPAPGRRRMNQGH--ASPGDTDDDFRHLLGAYVSDVLSAAPQH--------AKSRCQGYWNEGRA 421
            ||.||.:.....|  ......||:|:..|...|.  |..||::        ||..|:......:|
Zfish   312 LPHPGLKVATNPHFDGRLRGIDDEFKRELQNLVP--LLLAPENLVEKEIGGAKVTCRDLVEYFKA 374

Human   422 VARGDRRLLTGQQLAQEIKNLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKREFEEYVRQQDVA 486
            ..    ::..|::|               |...|..:..|:.::|..|..||..:...:.|....
Zfish   375 YI----KIYQGEEL---------------PHPKSMLQATAEANNLTAVAGAKDTYNRTMEQVCGG 420

Human   487 TKRIFSA--LRVLPDTMRNLLSTQKDAILARHGVALLCKGRDQTLEALEAELQATAKAFMDS--- 546
            .|...:.  |:...|..:.....|...:....||....:.::|    ||.||......|:..   
Zfish   421 NKPYIAPVDLQRYHDEFKKTSVDQFRGVKKMGGVEFCHRYQEQ----LETELDEVYTNFVKHNES 481

Human   547 -------------YTMRFCGHL-AAVGGAVGAGLMGLAGGVVGAGMAAAALAAEAGMVAAG--AA 595
                         :.:.|..:: :.|.|.:|...:.....|| .|:...:|.|.:.:..:|  ..
Zfish   482 KNIFYAARTPATLFAVMFVTYMVSTVTGFIGLSFIAALASVV-MGVTLLSLCAWSYVRYSGEYRE 545

Human   596 VGAT 599
            ||.|
Zfish   546 VGVT 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 80/259 (31%)
atl2NP_001103492.1 GBP 86..357 CDD:460516 86/287 (30%)
Blue background indicates that the domain is not in the aligned region.

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