DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RNF112 and zmp:0000000527

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:XP_073783813.1 Gene:zmp:0000000527 / 100535674 ZFINID:ZDB-GENE-130530-530 Length:639 Species:Danio rerio


Alignment Length:583 Identity:103/583 - (17%)
Similarity:176/583 - (30%) Gaps:241/583 - (41%)


- Green bases have known domain annotations that are detailed below.


Human   127 QETCPVRAEPLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQ 191
            :|:......|:.|:...:.|.|.::..|: :.|:.   ...||.::||:|...:|||:|:|.|..
Zfish     7 EESAVSMDSPVCLIDTASDGKLCVQPAAL-QILQQ---IQQPVVVVAVVGLYRTGKSYLMNRLAG 67

Human   192 GLPGLESGEGGRPRGGEASLQGCRWGANGLARGIWMW--SHP-------FLLGKEGKKVAVFLVD 247
            ...|...|.                ......:|||||  .||       .||..||    :..||
Zfish    68 KHSGFALGS----------------TVESKTKGIWMWCVPHPTKAETTLLLLDTEG----LGDVD 112

Human   248 TGDAMSPELSRETRIKLCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQH 312
            .||      ||...| :.:|..:|||..:.::...:.:..::.|:....:.|       .:.::.
Zfish   113 KGD------SRHDTI-IFSLAVLLSSTLVFNSRGTIDNKAIEELQYVTELTE-------YIKVKS 163

Human   313 LDLLVRDS--------------------------------------------------------- 320
            .|..|.||                                                         
Zfish   164 PDEAVDDSEFVKFFPSFIWAVRDFTLELKIDGEDATEDQYLEFALKLKTGNSVQVKNYNLPRECI 228

Human   321 ---------------SHPNKAGQGHVGNIFQSTPLAASQRLSGRYPKVQELLQGKRARCCLL--- 367
                           |||::     |.::....|    ..:|.|:.:|.:       |.|..   
Zfish   229 RKYFPSRKCFTFPFPSHPDR-----VCDLESLDP----AEISDRFLEVSD-------RFCQFINE 277

Human   368 --PAPGRRRMNQGHASPGDTDDDFRHLLGAYVSDVLSAA---------------PQHAKSRCQGY 415
              |.   :.:..||...|..   ..||...||:.:.|.|               .|.|.......
Zfish   278 QSPV---KLLKDGHTVTGRV---LGHLAELYVNTISSGAVPCLENAVVALAQIENQAALQEALQV 336

Human   416 WNEG-----------------------------------------------RAVARGDRRLLTGQ 433
            :.||                                               .|:.:...|.|...
Zfish   337 YQEGMEEKKRAFPLELEEISLEHQCFSLMAKQTFMIRCFRDTDGTHLASLEEAIGQEFDRYLWDN 401

Human   434 QLAQEIK--NL-------------SGWMGRTGPGFTSPDEMAAQLHD---------LRKVEAAKR 474
            :.|.|:|  ||             .|:..|:| |:   |.....|.|         .::|:.|: 
Zfish   402 EKASEVKCENLLSVLSESMNERISEGFYARSG-GY---DLFCCDLEDTVSQYNTLAYKEVKIAE- 461

Human   475 EFEEYVRQQDVATKRIFSALRVLPDTMRNLLSTQKDAILARHGVALLCKGRDQTLEALEAELQ 537
            ..|::::|:...|..|..|...|.:..|.:...::.|:|....|.:    ::||...||.:::
Zfish   462 VLEKFLQQKAAVTSAILQADDKLTENERRICEERERAVLLEQQVEV----QEQTRLQLEQQME 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200
GBP 163..402 CDD:206650 59/324 (18%)
zmp:0000000527XP_073783813.1 None
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.