DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and rnf112.1

DIOPT Version :9

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:XP_031749012.1 Gene:rnf112.1 / 100492292 XenbaseID:XB-GENE-5960850 Length:621 Species:Xenopus tropicalis


Alignment Length:645 Identity:213/645 - (33%)
Similarity:323/645 - (50%) Gaps:66/645 - (10%)


- Green bases have known domain annotations that are detailed below.


Human    15 LGKRERKQSFMGNSGNSWSHTPFPKLELGLGPQPMAPRELPTCSICLERLRDPISLDCGHDFCIR 79
            :|....||..|...|.:    .|.|||           |..|||:||..|.||:|:.|||.||..
 Frog     1 MGGSSSKQPSMPREGAA----SFHKLE-----------EDITCSVCLSELTDPVSITCGHTFCRN 50

Human    80 C----FSTHRLPGCEPPCCPECRKICKQKR-----GLRSLGEKMKLLPQRPLPPALQETCPVRAE 135
            |    ::|.::.|..   ||||||:|.:.:     .|::|...::|:.:.  ..|.:||.|. |.
 Frog    51 CIVSYWATPQIWGYR---CPECRKVCPRDQLIPVHRLKNLVTNVQLVVRE--EQAKKETPPC-AI 109

Human   136 PLLLVRINASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGLESGE 200
            |  ||..::.|.|.....|:..|.......:.||.|:.::||:..|||||||::|:.|...|..|
 Frog   110 P--LVYTDSRGQLQTDEAAVQSCFLSSDVSNCPVVLICMIGEKRRGKSFLLNYILRALSCQERDE 172

Human   201 GGRPRGGEASLQGCRW--GANGLARGIWMWSHPFLLGKEGKKVAVFLVDTGDAMSPELSRETRIK 263
            .....|.:..|.|..|  |...:.:|||:|:.||:|.:.|:|:|||::||..::..|.||:..||
 Frog   173 PISLGGEDEPLSGFEWRAGTESITKGIWIWNKPFVLERNGEKMAVFVLDTEGSLDIESSRDISIK 237

Human   264 LCALTTMLSSYQILSTSQELKDTDLDYLEMFVHVAEVMGKHYGMVPIQHLDLLVRDSSHPNKAGQ 328
            |.||:.:||||.|.:.:..||.|:||||||:::|||:.||.:.:..:||||:|:||........:
 Frog   238 LSALSMILSSYLIFNVNSSLKTTELDYLEMYLYVAELAGKSFDLQYLQHLDILIRDWHDSLNCQR 302

Human   329 GHVGNIFQSTPLAASQRLSGRYPKVQELLQGKRARCCLLPAPGRRRMNQGHASPGDTDDDFRHLL 393
            |...:.....  ..:.|.:.|||.|.:.|:.....|||||.||:|.:.....|..|.|:||::.|
 Frog   303 GDAQSYINRE--TENLRKASRYPFVLDTLRSPSVGCCLLPHPGKRLLGDSQGSLSDMDEDFKNHL 365

Human   394 GAYVSDVLSAAPQHAKSRCQGYWNEGRAVARGDRRLLTGQQLAQEIKNLSGWMGRTGPGFTSPDE 458
            |.|::|::           :|.|...:....|::  :|..||..::|...|.:.:....|.||.|
 Frog   366 GNYITDLV-----------RGIWRHVKTDIHGEK--VTCAQLEGKLKEFVGLLQKEQYSFASPLE 417

Human   459 MAAQLHDLRKVEAAKREFEEYVRQQDVATKRIFSALRVLPDTMRNLLSTQKDAILARHGVALL-- 521
            |.....:.:.:.:.||||..::.....|:...|..|.|.|..|:...|......||.:..::.  
 Frog   418 MFFTFENRKNMSSVKREFLNHLDNLAPASSSPFKILGVTPSKMKGRTSEAAAHFLAVYEESIKGD 482

Human   522 -CKGRDQTLEALEAELQATAKAFMDSYTMRFCGHLAAVGGAVGAGLMGLAGGVVGAGMAAAALAA 585
             .:||...:|.:|:.|:.....|.|.|:.||......:|.|:|.|::.||||||||.:|...|||
 Frog   483 DSQGRQLLMEEMESILREAEDKFNDEYSKRFKKCAIGIGCAIGGGVLSLAGGVVGAAVAGTVLAA 547

Human   586 EA----GMVAAGAAVGATGAAV--------VGGGVGAGLAATVGCMEKEEDERLLE--GD 631
            ||    |...|....||.|..|        ||.|||||:...:...:.|.:::..|  ||
 Frog   548 EAVALVGSTTAAVITGAVGGTVTLGAIGTGVGAGVGAGVGGAIANRKTEAEQQTTEEGGD 607

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING 56..101 CDD:238093 23/48 (48%)
GBP 163..402 CDD:206650 93/240 (39%)
rnf112.1XP_031749012.1 RING_Ubox 25..70 CDD:418438 20/47 (43%)
P-loop_NTPase 140..374 CDD:422963 93/246 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 97 1.000 Domainoid score I30490
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H5176
Inparanoid 1 1.050 312 1.000 Inparanoid score I10424
NCBI 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG39698
OrthoDB 1 1.010 - - D187713at32523
OrthoFinder 1 1.000 - - FOG0006675
OrthoInspector 1 1.000 - - otm55209
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R11885
SonicParanoid 1 1.000 - - X3792
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1212.110

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