DRSC/TRiP Functional Genomics Resources

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Protein Alignment RNF112 and si:ch211-195h23.3

DIOPT Version :10

Sequence 1:XP_006721634.1 Gene:RNF112 / 7732 HGNCID:12968 Length:639 Species:Homo sapiens
Sequence 2:NP_001123874.1 Gene:si:ch211-195h23.3 / 100170660 ZFINID:ZDB-GENE-070912-174 Length:478 Species:Danio rerio


Alignment Length:174 Identity:39/174 - (22%)
Similarity:61/174 - (35%) Gaps:62/174 - (35%)


- Green bases have known domain annotations that are detailed below.


Human    31 SWSHTPFPKLELGLGP-QPMAPRELPTCSICLERLRDPISLDCGHDFCIRCF----STHRLPGCE 90
            ||.    |:|..|||. ||..|            |.|           ::||    |...||.||
Zfish   150 SWD----PRLLDGLGQMQPAGP------------LYD-----------VKCFNGSISKLHLPHCE 187

Human    91 PPCCPECRKICKQKRGLRSL------GEKMKLLPQRPLPPALQETCPVRAEPLLLVRINASGGLI 149
                     |..:...:..|      |..|:::.    |..:.||     ..::.:|..:..||:
Zfish   188 ---------IFSEGDNMDGLAVAHFTGGNMEIVQ----PITVTET-----HVMIDIRDLSLFGLL 234

Human   150 LRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLN-HLLQG 192
            ..     :...||::....:.|..:..|:...:..:|| |||.|
Zfish   235 WM-----KIFSHPISGQVLLFLRTLPVEEEEEEEKILNVHLLPG 273

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RNF112XP_006721634.1 RING-HC_RNF112 53..104 CDD:438200 10/54 (19%)
GBP 163..402 CDD:206650 8/31 (26%)
si:ch211-195h23.3NP_001123874.1 FIIND 121..363 CDD:463919 39/174 (22%)
CARD_ASC_NALP1 387..468 CDD:260039
Blue background indicates that the domain is not in the aligned region.

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